RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 VNN3Q9NY84 501 aa11.18□□□□□ -0.62
ERBB2-220ENST00000584684 CYB5R1Q9UHQ9 305 aa11.18□□□□□ -0.62
ERBB2-220ENST00000584684 BAIAP2Q9UQB8 552 aa11.18□□□□□ -0.62
ERBB2-220ENST00000584684 SAMHD1Q9Y3Z3 626 aaKnown RBP11.18□□□□□ -0.62
ERBB2-220ENST00000584684 AQP12BA6NM10 295 aa11.17□□□□□ -0.62
ERBB2-220ENST00000584684 TIMM8AO60220 97 aaPredicted RBP11.17□□□□□ -0.62
ERBB2-220ENST00000584684 GPANK1O95872 356 aa11.17□□□□□ -0.62
ERBB2-220ENST00000584684 GASTP01350 101 aa11.17□□□□□ -0.62
ERBB2-220ENST00000584684 RAC2P15153 192 aa11.17□□□□□ -0.62
ERBB2-220ENST00000584684 GGT2P36268 569 aa11.17□□□□□ -0.62
ERBB2-220ENST00000584684 LMO4P61968 165 aa11.17□□□□□ -0.62
ERBB2-220ENST00000584684 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.17□□□□□ -0.62
ERBB2-220ENST00000584684 ECH1Q13011 328 aa11.17□□□□□ -0.62
ERBB2-220ENST00000584684 CDK5R2Q13319 367 aa11.17□□□□□ -0.62
ERBB2-220ENST00000584684 CCNIQ14094 377 aa11.17□□□□□ -0.62
ERBB2-220ENST00000584684 HFEQ30201 348 aa11.17□□□□□ -0.62
ERBB2-220ENST00000584684 DNAL1Q4LDG9 190 aa11.17□□□□□ -0.62
ERBB2-220ENST00000584684 CLEC12AQ5QGZ9 265 aa11.17□□□□□ -0.62
ERBB2-220ENST00000584684 OTPQ5XKR4 325 aa11.17□□□□□ -0.62
ERBB2-220ENST00000584684 CD300LDQ6UXZ3 194 aa11.17□□□□□ -0.62
ERBB2-220ENST00000584684 COLCA1Q6ZS62 124 aa11.17□□□□□ -0.62
ERBB2-220ENST00000584684 AQP12AQ8IXF9 295 aa11.17□□□□□ -0.62
ERBB2-220ENST00000584684 AQP11Q8NBQ7 271 aa11.17□□□□□ -0.62
ERBB2-220ENST00000584684 OR52E2Q8NGJ4 325 aa11.17□□□□□ -0.62
ERBB2-220ENST00000584684 OR8D4Q8NGM9 314 aa11.17□□□□□ -0.62
ERBB2-220ENST00000584684 APOBEC3DQ96AK3 386 aaPredicted RBP11.17□□□□□ -0.62
ERBB2-220ENST00000584684 HAVCR1Q96D42 359 aa11.17□□□□□ -0.62
ERBB2-220ENST00000584684 LRGUKQ96M69 825 aa11.17□□□□□ -0.62
ERBB2-220ENST00000584684 POFUT1Q9H488 388 aa11.17□□□□□ -0.62
ERBB2-220ENST00000584684 PURGQ9UJV8 347 aaKnown RBP11.17□□□□□ -0.62
ERBB2-220ENST00000584684 STARD10Q9Y365 291 aa11.17□□□□□ -0.62
ERBB2-220ENST00000584684 GRIP1Q9Y3R0 1128 aa11.17□□□□□ -0.62
ERBB2-220ENST00000584684 WNT9BO14905 357 aa11.16□□□□□ -0.62
ERBB2-220ENST00000584684 TPD52L2O43399 206 aaKnown RBP11.16□□□□□ -0.62
ERBB2-220ENST00000584684 SPRY3O43610 288 aa11.16□□□□□ -0.62
ERBB2-220ENST00000584684 CDC14BO60729 498 aa11.16□□□□□ -0.62
ERBB2-220ENST00000584684 UBOX5O94941 541 aa11.16□□□□□ -0.62
ERBB2-220ENST00000584684 DBHP09172 617 aa11.16□□□□□ -0.62
ERBB2-220ENST00000584684 SRD5A1P18405 259 aa11.16□□□□□ -0.62
ERBB2-220ENST00000584684 SLC3A1Q07837 685 aa11.16□□□□□ -0.62
ERBB2-220ENST00000584684 TSTQ16762 297 aaKnown RBP11.16□□□□□ -0.62
ERBB2-220ENST00000584684 CR1LQ2VPA4 569 aa11.16□□□□□ -0.62
ERBB2-220ENST00000584684 ZNF362Q5T0B9 420 aaPredicted RBP11.16□□□□□ -0.62
ERBB2-220ENST00000584684 CFAP77Q6ZQR2 320 aa11.16□□□□□ -0.62
ERBB2-220ENST00000584684 GLCCI1Q86VQ1 547 aa11.16□□□□□ -0.62
ERBB2-220ENST00000584684 ADGRG5Q8IZF4 528 aa11.16□□□□□ -0.62
ERBB2-220ENST00000584684 OR2T33Q8NG76 320 aa11.16□□□□□ -0.62
ERBB2-220ENST00000584684 OR5L1Q8NGL2 311 aa11.16□□□□□ -0.62
ERBB2-220ENST00000584684 OR2T4Q8NH00 348 aa11.16□□□□□ -0.62
ERBB2-220ENST00000584684 SLC7A6Q92536 515 aa11.16□□□□□ -0.62
ERBB2-220ENST00000584684 TIMD4Q96H15 378 aa11.16□□□□□ -0.62
ERBB2-220ENST00000584684 CLPTM1LQ96KA5 538 aa11.16□□□□□ -0.62
ERBB2-220ENST00000584684 MDFIQ99750 246 aa11.16□□□□□ -0.62
ERBB2-220ENST00000584684 FN3KQ9H479 309 aa11.16□□□□□ -0.62
ERBB2-220ENST00000584684 MSL2Q9HCI7 577 aa11.16□□□□□ -0.62
ERBB2-220ENST00000584684 SRA1Q9HD15 236 aaKnown RBP11.16□□□□□ -0.62
ERBB2-220ENST00000584684 PNRC2Q9NPJ4 139 aaKnown RBP11.16□□□□□ -0.62
ERBB2-220ENST00000584684 TBC1D23Q9NUY8 699 aa11.16□□□□□ -0.62
ERBB2-220ENST00000584684 MRPL22Q9NWU5 206 aaKnown RBP11.16□□□□□ -0.62
ERBB2-220ENST00000584684 WIPI2Q9Y4P8 454 aa11.16□□□□□ -0.62
ERBB2-220ENST00000584684 A0A1B0GWJ7 208 aa11.15□□□□□ -0.62
ERBB2-220ENST00000584684 DHRS12A0PJE2 317 aa11.15□□□□□ -0.62
ERBB2-220ENST00000584684 MSMBP08118 114 aa11.15□□□□□ -0.62
ERBB2-220ENST00000584684 TNFSF4P23510 183 aa11.15□□□□□ -0.62
ERBB2-220ENST00000584684 CENPAP49450 140 aa11.15□□□□□ -0.62
ERBB2-220ENST00000584684 RSPO1Q2MKA7 263 aaPredicted RBP11.15□□□□□ -0.62
ERBB2-220ENST00000584684 SLC35F1Q5T1Q4 408 aa11.15□□□□□ -0.62
ERBB2-220ENST00000584684 CORO6Q6QEF8 472 aa11.15□□□□□ -0.62
ERBB2-220ENST00000584684 Q6ZR03 302 aa11.15□□□□□ -0.62
ERBB2-220ENST00000584684 CXXC5Q7LFL8 322 aaKnown RBP11.15□□□□□ -0.62
ERBB2-220ENST00000584684 OR2AJ1Q8NGZ0 328 aa11.15□□□□□ -0.62
ERBB2-220ENST00000584684 OR51F2Q8NH61 342 aa11.15□□□□□ -0.62
ERBB2-220ENST00000584684 BCAS4Q8TDM0 211 aa11.15□□□□□ -0.62
ERBB2-220ENST00000584684 RAB1CQ92928 201 aa11.15□□□□□ -0.62
ERBB2-220ENST00000584684 PTP4A1Q93096 173 aa11.15□□□□□ -0.62
ERBB2-220ENST00000584684 TMEM186Q96B77 213 aa11.15□□□□□ -0.62
ERBB2-220ENST00000584684 RAB39BQ96DA2 213 aa11.15□□□□□ -0.62
ERBB2-220ENST00000584684 CMBLQ96DG6 245 aa11.15□□□□□ -0.62
ERBB2-220ENST00000584684 ATF6BQ99941 703 aa11.15□□□□□ -0.62
ERBB2-220ENST00000584684 THTPAQ9BU02 230 aa11.15□□□□□ -0.62
ERBB2-220ENST00000584684 RBM4Q9BWF3 364 aaKnown RBP11.15□□□□□ -0.62
ERBB2-220ENST00000584684 C1QTNF5Q9BXJ0 243 aa11.15□□□□□ -0.62
ERBB2-220ENST00000584684 NMNAT2Q9BZQ4 307 aa11.15□□□□□ -0.62
ERBB2-220ENST00000584684 DDX28Q9NUL7 540 aaKnown RBP11.15□□□□□ -0.62
ERBB2-220ENST00000584684 CACNG2Q9Y698 323 aa11.15□□□□□ -0.62
ERBB2-220ENST00000584684 U3KQV3 271 aa11.15□□□□□ -0.62
ERBB2-220ENST00000584684 TRAV20A0A0B4J274 112 aa11.14□□□□□ -0.63
ERBB2-220ENST00000584684 FAM157AC9JC47 383 aa11.14□□□□□ -0.63
ERBB2-220ENST00000584684 SURF4O15260 269 aa11.14□□□□□ -0.63
ERBB2-220ENST00000584684 DEAF1O75398 565 aaPredicted RBP11.14□□□□□ -0.63
ERBB2-220ENST00000584684 ACSM4P0C7M7 580 aa11.14□□□□□ -0.63
ERBB2-220ENST00000584684 OTX1P32242 354 aaPredicted RBP11.14□□□□□ -0.63
ERBB2-220ENST00000584684 SLC25A1P53007 311 aa11.14□□□□□ -0.63
ERBB2-220ENST00000584684 TNFAIP6P98066 277 aaPredicted RBP11.14□□□□□ -0.63
ERBB2-220ENST00000584684 PCK2Q16822 640 aa11.14□□□□□ -0.63
ERBB2-220ENST00000584684 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.14□□□□□ -0.63
ERBB2-220ENST00000584684 LINC00346Q8IVM7 164 aa11.14□□□□□ -0.63
ERBB2-220ENST00000584684 CYB561A3Q8NBI2 242 aa11.14□□□□□ -0.63
ERBB2-220ENST00000584684 SLC37A3Q8NCC5 494 aa11.14□□□□□ -0.63
ERBB2-220ENST00000584684 PROKR2Q8NFJ6 384 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms