RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 DTWD2Q8NBA8 298 aa11.9□□□□□ -0.5
RNF43-208ENST00000584437 EDAQ92838 391 aa11.9□□□□□ -0.5
RNF43-208ENST00000584437 HSF1Q00613 529 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 GPNMBQ14956 572 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 ZFP62Q8NB50 900 aaPredicted RBP11.89□□□□□ -0.51
RNF43-208ENST00000584437 OR5B3Q8NH48 314 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 OR51E1Q8TCB6 317 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 ZFPM2Q8WW38 1151 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 C19orf43Q9BQ61 176 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 SOX7Q9BT81 388 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 RNF186Q9NXI6 227 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 SEC14L6B5MCN3 397 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 ELAVL1Q15717 326 aaKnown RBP11.89□□□□□ -0.51
RNF43-208ENST00000584437 NCR3LG1Q68D85 454 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 OR10P1Q8NGE3 313 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 DOK1Q99704 481 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 LRP3O75074 770 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 COX5AP20674 150 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 HRH1P35367 487 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 C11orf87Q6NUJ2 197 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 RXFP4Q8TDU9 374 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 FAM234AQ9H0X4 552 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 R4GMQ9 66 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 SLC2A1P11166 492 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 VAMP3Q15836 100 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 PCK2Q16822 640 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 GLCCI1Q86VQ1 547 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 AGBL5Q8NDL9 886 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 OR13C5Q8NGS8 318 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 MARCH1Q8TCQ1 289 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 TPPP3Q9BW30 176 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 ZDHHC5Q9C0B5 715 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 OPA3Q9H6K4 179 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 TNFRSF12AQ9NP84 129 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 SLC23A1Q9UHI7 598 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 ZNF346Q9UL40 294 aaKnown RBP11.89□□□□□ -0.51
RNF43-208ENST00000584437 CTRB1P17538 263 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 FGF7P21781 194 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 ACKR1Q16570 336 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 LINC00303Q3SY05 128 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 COL13A1Q5TAT6 717 aaPredicted RBP11.89□□□□□ -0.51
RNF43-208ENST00000584437 PRAMEF5Q5TYX0 476 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 PRAMEF6Q5VXH4 476 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 TMEM268Q5VZI3 342 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 CTRB2Q6GPI1 263 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 ADGRG3Q86Y34 549 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 NUDCD2Q8WVJ2 157 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 SLC35E1Q96K37 410 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 CIB3Q96Q77 187 aaPredicted RBP11.89□□□□□ -0.51
RNF43-208ENST00000584437 PLA2G12AQ9BZM1 189 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 CACFD1Q9UGQ2 172 aa11.89□□□□□ -0.51
RNF43-208ENST00000584437 RNASEK-C17orf49H0YIS7 233 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 SSSCA1O60232 199 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 SBK3P0C264 359 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 MOGAT2Q3SYC2 334 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 THEM4Q5T1C6 240 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 LYSMD4Q5XG99 296 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 XAF1Q6GPH4 301 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 LHFPL2Q6ZUX7 228 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 THNSL2Q86YJ6 484 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 ARHGEF39Q8N4T4 335 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 RPUSD4Q96CM3 377 aaKnown RBP11.88□□□□□ -0.51
RNF43-208ENST00000584437 HHIPQ96QV1 700 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 CHRDL1Q9BU40 450 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 LAT2Q9GZY6 243 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 SHARPINQ9H0F6 387 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 NGBQ9NPG2 151 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 CTSFQ9UBX1 484 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 YKT6O15498 198 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 ENSAO43768 121 aaKnown RBP11.88□□□□□ -0.51
RNF43-208ENST00000584437 RPA2P15927 270 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 TCN2P20062 427 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 NTF3P20783 257 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 RAC1P63000 192 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 SLC17A1Q14916 467 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 CXorf58Q96LI9 332 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 S1PR5Q9H228 398 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 PISDQ9UG56 409 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 GDF2Q9UK05 429 aaPredicted RBP11.88□□□□□ -0.51
RNF43-208ENST00000584437 NUMA1Q14980 2115 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 MEIKINA0A087WXM9 373 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 PHOX2AO14813 284 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 TMPRSS11DO60235 418 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 PNLIPRP3Q17RR3 467 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 SPANXN5Q5MJ07 72 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 C12orf73Q69YU5 71 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 GTF2H5Q6ZYL4 71 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 CALHM3Q86XJ0 350 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 RTL8AQ9BWD3 113 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 GPR173Q9NS66 373 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 LIN7CQ9NUP9 197 aaKnown RBP11.88□□□□□ -0.51
RNF43-208ENST00000584437 KCND3Q9UK17 655 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 hCG_1809904A0A1W2PP81 198 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 A0A1W2PPE2 198 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 A0A1W2PR64 198 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 A0A1W2PRV1 198 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 H3BQ06 376 aaPredicted RBP11.88□□□□□ -0.51
RNF43-208ENST00000584437 CHEK1O14757 476 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 SIGLEC6O43699 453 aa11.88□□□□□ -0.51
RNF43-208ENST00000584437 C4orf17Q53FE4 359 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms