RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 MRPL22Q9NWU5 206 aaKnown RBP23.2■■□□□ 1.3
SMARCD2-210ENST00000584400 ZDHHC8Q9ULC8 765 aa23.2■■□□□ 1.3
SMARCD2-210ENST00000584400 TIMM8AO60220 97 aaPredicted RBP23.19■■□□□ 1.3
SMARCD2-210ENST00000584400 HMGN1P05114 100 aa23.19■■□□□ 1.3
SMARCD2-210ENST00000584400 ZNF23P17027 643 aa23.19■■□□□ 1.3
SMARCD2-210ENST00000584400 HOXB4P17483 251 aaPredicted RBP23.19■■□□□ 1.3
SMARCD2-210ENST00000584400 PAICSP22234 425 aaKnown RBP23.19■■□□□ 1.3
SMARCD2-210ENST00000584400 POU1F1P28069 291 aa23.19■■□□□ 1.3
SMARCD2-210ENST00000584400 MAGEB1P43366 347 aa23.19■■□□□ 1.3
SMARCD2-210ENST00000584400 MMP15P51511 669 aa23.19■■□□□ 1.3
SMARCD2-210ENST00000584400 CHN2P52757 468 aa23.19■■□□□ 1.3
SMARCD2-210ENST00000584400 CCL8P80075 99 aa23.19■■□□□ 1.3
SMARCD2-210ENST00000584400 RIN1Q13671 783 aa23.19■■□□□ 1.3
SMARCD2-210ENST00000584400 LINC00346Q8IVM7 164 aa23.19■■□□□ 1.3
SMARCD2-210ENST00000584400 OR9Q1Q8NGQ5 310 aa23.19■■□□□ 1.3
SMARCD2-210ENST00000584400 SLC7A6Q92536 515 aa23.19■■□□□ 1.3
SMARCD2-210ENST00000584400 KIF17Q9P2E2 1029 aa23.19■■□□□ 1.3
SMARCD2-210ENST00000584400 INAFM1C9JVW0 142 aa23.18■■□□□ 1.3
SMARCD2-210ENST00000584400 TIPRLO75663 272 aa23.18■■□□□ 1.3
SMARCD2-210ENST00000584400 DBHP09172 617 aa23.18■■□□□ 1.3
SMARCD2-210ENST00000584400 PSG7Q13046 419 aa23.18■■□□□ 1.3
SMARCD2-210ENST00000584400 CFAP77Q6ZQR2 320 aa23.18■■□□□ 1.3
SMARCD2-210ENST00000584400 POM121Q96HA1 1249 aa23.18■■□□□ 1.3
SMARCD2-210ENST00000584400 NMNAT2Q9BZQ4 307 aa23.18■■□□□ 1.3
SMARCD2-210ENST00000584400 EGLN1Q9GZT9 426 aa23.18■■□□□ 1.3
SMARCD2-210ENST00000584400 SAP30LQ9HAJ7 183 aa23.18■■□□□ 1.3
SMARCD2-210ENST00000584400 YAE1D1Q9NRH1 226 aa23.18■■□□□ 1.3
SMARCD2-210ENST00000584400 STARD10Q9Y365 291 aa23.18■■□□□ 1.3
SMARCD2-210ENST00000584400 IGHV4-61A0A0C4DH41 118 aa23.17■■□□□ 1.3
SMARCD2-210ENST00000584400 LYNX1G3V0Z9 82 aa23.17■■□□□ 1.3
SMARCD2-210ENST00000584400 TACSTD2P09758 323 aa23.17■■□□□ 1.3
SMARCD2-210ENST00000584400 LYNX1P0DP58 116 aa23.17■■□□□ 1.3
SMARCD2-210ENST00000584400 FCGR1AP12314 374 aa23.17■■□□□ 1.3
SMARCD2-210ENST00000584400 RAC2P15153 192 aa23.17■■□□□ 1.3
SMARCD2-210ENST00000584400 SPI1P17947 270 aa23.17■■□□□ 1.3
SMARCD2-210ENST00000584400 GPR6P46095 362 aaPredicted RBP23.17■■□□□ 1.3
SMARCD2-210ENST00000584400 GINS1Q14691 196 aa23.17■■□□□ 1.3
SMARCD2-210ENST00000584400 CCDC121Q6ZUS5 278 aa23.17■■□□□ 1.3
SMARCD2-210ENST00000584400 OR51L1Q8NGJ5 315 aa23.17■■□□□ 1.3
SMARCD2-210ENST00000584400 OR6K6Q8NGW6 343 aa23.17■■□□□ 1.3
SMARCD2-210ENST00000584400 SPTSSAQ969W0 71 aa23.17■■□□□ 1.3
SMARCD2-210ENST00000584400 AP4S1Q9Y587 144 aa23.17■■□□□ 1.3
SMARCD2-210ENST00000584400 TVP23AA6NH52 213 aa23.16■■□□□ 1.3
SMARCD2-210ENST00000584400 A8MV72 311 aaPredicted RBP23.16■■□□□ 1.3
SMARCD2-210ENST00000584400 SPRY3O43610 288 aa23.16■■□□□ 1.3
SMARCD2-210ENST00000584400 NCR1O76036 304 aa23.16■■□□□ 1.3
SMARCD2-210ENST00000584400 ADH4P08319 380 aa23.16■■□□□ 1.3
SMARCD2-210ENST00000584400 KITLGP21583 273 aa23.16■■□□□ 1.3
SMARCD2-210ENST00000584400 PRKACGP22612 351 aa23.16■■□□□ 1.3
SMARCD2-210ENST00000584400 COL8A2P25067 703 aa23.16■■□□□ 1.3
SMARCD2-210ENST00000584400 FASP25445 335 aa23.16■■□□□ 1.3
SMARCD2-210ENST00000584400 CRYBB2P43320 205 aa23.16■■□□□ 1.3
SMARCD2-210ENST00000584400 ENTPD1P49961 510 aa23.16■■□□□ 1.3
SMARCD2-210ENST00000584400 DBPQ10586 325 aaPredicted RBP23.16■■□□□ 1.3
SMARCD2-210ENST00000584400 TSTQ16762 297 aaKnown RBP23.16■■□□□ 1.3
SMARCD2-210ENST00000584400 HIPK1Q86Z02 1210 aa23.16■■□□□ 1.3
SMARCD2-210ENST00000584400 HS3ST5Q8IZT8 346 aa23.16■■□□□ 1.3
SMARCD2-210ENST00000584400 IQCF1Q8N6M8 205 aa23.16■■□□□ 1.3
SMARCD2-210ENST00000584400 OR5K1Q8NHB7 308 aa23.16■■□□□ 1.3
SMARCD2-210ENST00000584400 HPS1Q92902 700 aa23.16■■□□□ 1.3
SMARCD2-210ENST00000584400 UTP4Q969X6 686 aaKnown RBP23.16■■□□□ 1.3
SMARCD2-210ENST00000584400 HAVCR1Q96D42 359 aa23.16■■□□□ 1.3
SMARCD2-210ENST00000584400 CMBLQ96DG6 245 aa23.16■■□□□ 1.3
SMARCD2-210ENST00000584400 NTN4Q9HB63 628 aa23.16■■□□□ 1.3
SMARCD2-210ENST00000584400 PURGQ9UJV8 347 aaKnown RBP23.16■■□□□ 1.3
SMARCD2-210ENST00000584400 COMMD3-BMI1R4GMX3 469 aa23.16■■□□□ 1.3
SMARCD2-210ENST00000584400 F5H5K5 113 aa23.15■■□□□ 1.3
SMARCD2-210ENST00000584400 IGHV1-46P01743 117 aa23.15■■□□□ 1.3
SMARCD2-210ENST00000584400 IGHV4-31P0DP07 118 aa23.15■■□□□ 1.3
SMARCD2-210ENST00000584400 TPTEP56180 551 aa23.15■■□□□ 1.3
SMARCD2-210ENST00000584400 ATP6AP1Q15904 470 aa23.15■■□□□ 1.3
SMARCD2-210ENST00000584400 TEX30Q5JUR7 227 aa23.15■■□□□ 1.3
SMARCD2-210ENST00000584400 C6orf52Q5T4I8 152 aa23.15■■□□□ 1.3
SMARCD2-210ENST00000584400 OTULINQ96BN8 352 aa23.15■■□□□ 1.3
SMARCD2-210ENST00000584400 ELMOD3Q96FG2 381 aa23.15■■□□□ 1.3
SMARCD2-210ENST00000584400 DUS3LQ96G46 650 aaKnown RBP23.15■■□□□ 1.3
SMARCD2-210ENST00000584400 PAPOLBQ9NRJ5 636 aaKnown RBP23.15■■□□□ 1.3
SMARCD2-210ENST00000584400 IGHV1-69-2A0A0G2JMI3 117 aa23.14■■□□□ 1.29
SMARCD2-210ENST00000584400 GYPBP06028 91 aa23.14■■□□□ 1.29
SMARCD2-210ENST00000584400 SPARCP09486 303 aa23.14■■□□□ 1.29
SMARCD2-210ENST00000584400 TNFSF4P23510 183 aa23.14■■□□□ 1.29
SMARCD2-210ENST00000584400 HFEQ30201 348 aa23.14■■□□□ 1.29
SMARCD2-210ENST00000584400 KRTAP27-1Q3LI81 207 aa23.14■■□□□ 1.29
SMARCD2-210ENST00000584400 FBXW12Q6X9E4 464 aa23.14■■□□□ 1.29
SMARCD2-210ENST00000584400 ZNRF4Q8WWF5 429 aa23.14■■□□□ 1.29
SMARCD2-210ENST00000584400 YIPF5Q969M3 257 aa23.14■■□□□ 1.29
SMARCD2-210ENST00000584400 PLEKHA8Q96JA3 519 aa23.14■■□□□ 1.29
SMARCD2-210ENST00000584400 MAP6Q96JE9 813 aa23.14■■□□□ 1.29
SMARCD2-210ENST00000584400 PNRC2Q9NPJ4 139 aaKnown RBP23.14■■□□□ 1.29
SMARCD2-210ENST00000584400 ZNF275Q9NSD4 429 aaPredicted RBP23.14■■□□□ 1.29
SMARCD2-210ENST00000584400 ZSCAN5BA6NJL1 495 aa23.13■■□□□ 1.29
SMARCD2-210ENST00000584400 PRR23D1E9PI22 279 aaPredicted RBP23.13■■□□□ 1.29
SMARCD2-210ENST00000584400 ZNF593O00488 134 aaPredicted RBP23.13■■□□□ 1.29
SMARCD2-210ENST00000584400 CDC14BO60729 498 aa23.13■■□□□ 1.29
SMARCD2-210ENST00000584400 LILRA1O75019 489 aa23.13■■□□□ 1.29
SMARCD2-210ENST00000584400 PRR23D2P0DMB1 279 aaPredicted RBP23.13■■□□□ 1.29
SMARCD2-210ENST00000584400 CDK5Q00535 292 aa23.13■■□□□ 1.29
SMARCD2-210ENST00000584400 MALLQ13021 153 aa23.13■■□□□ 1.29
SMARCD2-210ENST00000584400 PCK2Q16822 640 aa23.13■■□□□ 1.29
SMARCD2-210ENST00000584400 ACSM5Q6NUN0 579 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms