RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 CCDC124Q96CT7 223 aaKnown RBP8.42□□□□□ -1.06
SKA2-208ENST00000583927 HAVCR1Q96D42 359 aa8.42□□□□□ -1.06
SKA2-208ENST00000583927 ELMOD3Q96FG2 381 aa8.42□□□□□ -1.06
SKA2-208ENST00000583927 CLPTM1LQ96KA5 538 aa8.42□□□□□ -1.06
SKA2-208ENST00000583927 RBM4Q9BWF3 364 aaKnown RBP8.42□□□□□ -1.06
SKA2-208ENST00000583927 CHID1Q9BWS9 393 aa8.42□□□□□ -1.06
SKA2-208ENST00000583927 PLA2G12AQ9BZM1 189 aa8.42□□□□□ -1.06
SKA2-208ENST00000583927 NMNAT2Q9BZQ4 307 aa8.42□□□□□ -1.06
SKA2-208ENST00000583927 EGLN1Q9GZT9 426 aa8.42□□□□□ -1.06
SKA2-208ENST00000583927 RERGLQ9H628 205 aa8.42□□□□□ -1.06
SKA2-208ENST00000583927 EGLN3Q9H6Z9 239 aa8.42□□□□□ -1.06
SKA2-208ENST00000583927 SAP30LQ9HAJ7 183 aa8.42□□□□□ -1.06
SKA2-208ENST00000583927 SRA1Q9HD15 236 aaKnown RBP8.42□□□□□ -1.06
SKA2-208ENST00000583927 RPRD1BQ9NQG5 326 aaKnown RBP8.42□□□□□ -1.06
SKA2-208ENST00000583927 DECR2Q9NUI1 292 aa8.42□□□□□ -1.06
SKA2-208ENST00000583927 VNN3Q9NY84 501 aa8.42□□□□□ -1.06
SKA2-208ENST00000583927 KCNS2Q9ULS6 477 aa8.42□□□□□ -1.06
SKA2-208ENST00000583927 IGHV1-69-2A0A0G2JMI3 117 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 LOC100289279A0A1B0GTE1 492 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 A0A1B0GWJ7 208 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 TCRBV3S1A0A5B6 114 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 DHRS12A0PJE2 317 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 LRP5LA4QPB2 252 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 ZSCAN5BA6NJL1 495 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 B4DSR2 109 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 CST1P01037 141 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 IFNA2P01563 188 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 OTX1P32242 354 aaPredicted RBP8.41□□□□□ -1.06
SKA2-208ENST00000583927 GGT2P36268 569 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 CENPAP49450 140 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 BLVRAP53004 296 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 SLC25A1P53007 311 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 SLC3A1Q07837 685 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 TRIP10Q15642 601 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 RSPO1Q2MKA7 263 aaPredicted RBP8.41□□□□□ -1.06
SKA2-208ENST00000583927 TEX30Q5JUR7 227 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 SPATA46Q5T0L3 261 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 OR2T33Q8NG76 320 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 OR52E2Q8NGJ4 325 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 OR2T4Q8NH00 348 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 GIPC3Q8TF64 312 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 CANT1Q8WVQ1 401 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 SOX7Q9BT81 388 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 C1QTNF5Q9BXJ0 243 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 YY1AP1Q9H869 796 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 PNRC2Q9NPJ4 139 aaKnown RBP8.41□□□□□ -1.06
SKA2-208ENST00000583927 MRPL22Q9NWU5 206 aaKnown RBP8.41□□□□□ -1.06
SKA2-208ENST00000583927 PURGQ9UJV8 347 aaKnown RBP8.41□□□□□ -1.06
SKA2-208ENST00000583927 POLR1DQ9Y2S0 133 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 STARD10Q9Y365 291 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 GRIP1Q9Y3R0 1128 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 U3KQV3 271 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 DNHD1Q96M86 4753 aa8.41□□□□□ -1.06
SKA2-208ENST00000583927 CLDN25C9JDP6 229 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 DNAJC8O75937 253 aaPredicted RBP8.4□□□□□ -1.06
SKA2-208ENST00000583927 ATP5HO75947 161 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 GPANK1O95872 356 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 TGFAP01135 160 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 IFNGP01579 166 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 PCMT1P22061 227 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 IGFBP5P24593 272 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 IL2RGP31785 369 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 DVL1P1P54792 670 aaPredicted RBP8.4□□□□□ -1.06
SKA2-208ENST00000583927 LMO4P61968 165 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 BNIP1Q12981 228 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 FLOT2Q14254 428 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 MEP1BQ16820 701 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 HFEQ30201 348 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 ALKBH6Q3KRA9 238 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 CLEC12AQ5QGZ9 265 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 SLC35F1Q5T1Q4 408 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 USP51Q70EK9 711 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 RHOUQ7L0Q8 258 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 SLC37A3Q8NCC5 494 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 OR10G2Q8NGC3 310 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 CLDND2Q8NHS1 167 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 SLC7A6Q92536 515 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 NRBF2Q96F24 287 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 FEVQ99581 238 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 ATF6BQ99941 703 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 CDADC1Q9BWV3 514 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 TSSK6Q9BXA6 273 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 BEX2Q9BXY8 128 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 SHARPINQ9H0F6 387 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 MMADHCQ9H3L0 296 aaPredicted RBP8.4□□□□□ -1.06
SKA2-208ENST00000583927 POFUT1Q9H488 388 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 CMC2Q9NRP2 79 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 DDX28Q9NUL7 540 aaKnown RBP8.4□□□□□ -1.06
SKA2-208ENST00000583927 TBC1D23Q9NUY8 699 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 IL19Q9UHD0 177 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 POMPQ9Y244 141 aa8.4□□□□□ -1.06
SKA2-208ENST00000583927 KIAA1324LA8MWY0 1029 aaPredicted RBP8.39□□□□□ -1.07
SKA2-208ENST00000583927 IQCF6A8MYZ5 107 aa8.39□□□□□ -1.07
SKA2-208ENST00000583927 IFNL4K9M1U5 179 aa8.39□□□□□ -1.07
SKA2-208ENST00000583927 SURF4O15260 269 aa8.39□□□□□ -1.07
SKA2-208ENST00000583927 GSC2O15499 205 aa8.39□□□□□ -1.07
SKA2-208ENST00000583927 PPIHO43447 177 aaKnown RBP8.39□□□□□ -1.07
SKA2-208ENST00000583927 TIMM8AO60220 97 aaPredicted RBP8.39□□□□□ -1.07
SKA2-208ENST00000583927 DBHP09172 617 aa8.39□□□□□ -1.07
SKA2-208ENST00000583927 ACSM4P0C7M7 580 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms