RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 DPYSL3Q14195 570 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 PON3Q15166 354 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 LRRC26Q2I0M4 334 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 ISXQ2M1V0 245 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 PABPC1L2AQ5JQF8 200 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 NXNL2Q5VZ03 156 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 PLCXD3Q63HM9 321 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 LAMTOR1Q6IAA8 161 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 EPGNQ6UW88 154 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 HSDL2Q6YN16 418 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 LHFPL3Q86UP9 236 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 P2RY8Q86VZ1 359 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 TPRA1Q86W33 373 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 RDH10Q8IZV5 341 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 PDIK1LQ8N165 341 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 EIF4E3Q8N5X7 224 aaKnown RBP4.01□□□□□ -1.77
SS18-223ENST00000583595 PQLC3Q8N755 202 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 YIPF7Q8N8F6 280 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 TTC29Q8NA56 475 aaPredicted RBP4.01□□□□□ -1.77
SS18-223ENST00000583595 OR4F6Q8NGB9 312 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 OR4K14Q8NGD5 310 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 RNASE11Q8TAA1 199 aaKnown RBP4.01□□□□□ -1.77
SS18-223ENST00000583595 NDNFQ8TB73 568 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 SSC4DQ8WTU2 575 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 GLYATL2Q8WU03 294 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 ARNTL2Q8WYA1 636 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 NRGNQ92686 78 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 RORBQ92753 470 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 CPNE4Q96A23 557 aaPredicted RBP4.01□□□□□ -1.77
SS18-223ENST00000583595 ATXN7L3BQ96GX2 97 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 MBOAT7Q96N66 472 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 RDH12Q96NR8 316 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 NODALQ96S42 347 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 CNN2Q99439 309 aaKnown RBP4.01□□□□□ -1.77
SS18-223ENST00000583595 KLF6Q99612 283 aaPredicted RBP4.01□□□□□ -1.77
SS18-223ENST00000583595 LXNQ9BS40 222 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 MED18Q9BUE0 208 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 PDCD10Q9BUL8 212 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 KRTAP2-2Q9BYT5 123 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 ZYG11BQ9C0D3 744 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 SLC22A4Q9H015 551 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 ILKAPQ9H0C8 392 aaPredicted RBP4.01□□□□□ -1.77
SS18-223ENST00000583595 FBXO44Q9H4M3 255 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 RGCCQ9H4X1 137 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 ELOVL6Q9H5J4 265 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 ASB7Q9H672 318 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 C11orf49Q9H6J7 331 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 NMRAL1Q9HBL8 299 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 ZNF334Q9HCZ1 680 aaPredicted RBP4.01□□□□□ -1.77
SS18-223ENST00000583595 ACP6Q9NPH0 428 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 INPP5EQ9NRR6 644 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 AGPAT3Q9NRZ7 376 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 LYARQ9NX58 379 aaKnown RBP4.01□□□□□ -1.77
SS18-223ENST00000583595 COPZ2Q9P299 210 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 GALPQ9UBC7 116 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 MARCOQ9UEW3 520 aaPredicted RBP4.01□□□□□ -1.77
SS18-223ENST00000583595 MLXQ9UH92 298 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 NUFIP1Q9UHK0 495 aaKnown RBP4.01□□□□□ -1.77
SS18-223ENST00000583595 SCML1Q9UN30 329 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 NTNG1Q9Y2I2 539 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 PYGO1Q9Y3Y4 419 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 HSPB11Q9Y547 144 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 RIC1Q4ADV7 1423 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 PTPRFP10586 1907 aa4.01□□□□□ -1.77
SS18-223ENST00000583595 MYH3P11055 1940 aa4□□□□□ -1.77
SS18-223ENST00000583595 TRBV11-1A0A0K0K1C0 115 aa4□□□□□ -1.77
SS18-223ENST00000583595 HSFX4A0A1B0GTS1 333 aaPredicted RBP4□□□□□ -1.77
SS18-223ENST00000583595 TEX48A0A1B0GUV7 120 aa4□□□□□ -1.77
SS18-223ENST00000583595 HSFX3A0A1B0GWH4 333 aaPredicted RBP4□□□□□ -1.77
SS18-223ENST00000583595 CIB4A0PJX0 185 aa4□□□□□ -1.77
SS18-223ENST00000583595 EFCAB7A8K855 629 aa4□□□□□ -1.77
SS18-223ENST00000583595 GABRR3A8MPY1 467 aa4□□□□□ -1.77
SS18-223ENST00000583595 PMS2P5A8MQ11 134 aa4□□□□□ -1.77
SS18-223ENST00000583595 DNASE2O00115 360 aaPredicted RBP4□□□□□ -1.77
SS18-223ENST00000583595 KCNK1O00180 336 aa4□□□□□ -1.77
SS18-223ENST00000583595 CDC7O00311 574 aa4□□□□□ -1.77
SS18-223ENST00000583595 KPNA3O00505 521 aaPredicted RBP4□□□□□ -1.77
SS18-223ENST00000583595 SLC31A2O15432 143 aa4□□□□□ -1.77
SS18-223ENST00000583595 RAMP1O60894 148 aa4□□□□□ -1.77
SS18-223ENST00000583595 ZMPSTE24O75844 475 aa4□□□□□ -1.77
SS18-223ENST00000583595 SNAPC5O75971 98 aa4□□□□□ -1.77
SS18-223ENST00000583595 OR2J3O76001 311 aa4□□□□□ -1.77
SS18-223ENST00000583595 SUPT7LO94864 414 aa4□□□□□ -1.77
SS18-223ENST00000583595 SERPIND1P05546 499 aa4□□□□□ -1.77
SS18-223ENST00000583595 C2P06681 752 aa4□□□□□ -1.77
SS18-223ENST00000583595 ZDHHC11BP0C7U3 371 aa4□□□□□ -1.77
SS18-223ENST00000583595 RNF224P0DH78 156 aa4□□□□□ -1.77
SS18-223ENST00000583595 SPI1P17947 270 aa4□□□□□ -1.77
SS18-223ENST00000583595 MYL9P24844 172 aa4□□□□□ -1.77
SS18-223ENST00000583595 CHRNB4P30926 498 aa4□□□□□ -1.77
SS18-223ENST00000583595 CD79BP40259 229 aa4□□□□□ -1.77
SS18-223ENST00000583595 ETV5P41161 510 aa4□□□□□ -1.77
SS18-223ENST00000583595 ACTR1BP42025 376 aa4□□□□□ -1.77
SS18-223ENST00000583595 XCR1P46094 333 aa4□□□□□ -1.77
SS18-223ENST00000583595 SERPINB9P50453 376 aa4□□□□□ -1.77
SS18-223ENST00000583595 PRELPP51888 382 aa4□□□□□ -1.77
SS18-223ENST00000583595 ACLYP53396 1101 aa4□□□□□ -1.77
SS18-223ENST00000583595 MFAP2P55001 183 aa4□□□□□ -1.77
SS18-223ENST00000583595 SNRPD1P62314 119 aaKnown RBP4□□□□□ -1.77
SS18-223ENST00000583595 TFAMQ00059 246 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms