RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 ADRA2AP08913 450 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 ERGP11308 486 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 PSMC3P17980 439 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 ATF6P18850 670 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 CSNK2A2P19784 350 aaPredicted RBP2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 RAB3AP20336 220 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 SSTR5P35346 364 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 SLC1A2P43004 574 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 P2RX1P51575 399 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 PPP1CBP62140 327 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 SEMG2Q02383 582 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 EIF4EBP1Q13541 118 aaPredicted RBP2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 ZNF266Q14584 549 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 C16orf72Q14CZ0 275 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 IRF4Q15306 451 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 SPESP1Q6UW49 350 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 TMEM205Q6UW68 189 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 NTM-AS1Q6ZSK4 140 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 MBOAT2Q6ZWT7 520 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 ABHD12BQ7Z5M8 362 aaPredicted RBP2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 NPWQ8N729 165 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 CHST4Q8NCG5 386 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 PIFOQ8TCI5 191 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 FRZBQ92765 325 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 ZNF382Q96SR6 550 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 TIMM17AQ99595 171 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 ANP32EQ9BTT0 268 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 ANKRD60Q9BZ19 345 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 ELOVL6Q9H5J4 265 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 ACP6Q9NPH0 428 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 NECAP2Q9NVZ3 263 aa2.79□□□□□ -1.96
SMCHD1-205ENST00000581383 IGLV4-60A0A075B6I1 120 aa2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 NCBP2LA6PVI3 153 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 H7C0C1 242 aa2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 H7C417 338 aa2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 CDC40O60508 579 aaKnown RBP eCLIP2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 FOXH1O75593 365 aa2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 CLTAP09496 248 aa2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 DTYMKP23919 212 aa2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 CDKN2DP55273 166 aa2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 UBE2MP61081 183 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 ITIH4Q14624 930 aa2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 SMUG1Q53HV7 270 aa2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 TPTE2P1Q5T6R2 138 aa2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 FBXW9Q5XUX1 488 aa2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 FAM71AQ8IYT1 594 aa2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 SNX31Q8N9S9 440 aa2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 BBOF1Q8ND07 529 aa2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 COQ8AQ8NI60 647 aa2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 OR51E1Q8TCB6 317 aa2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 C15orf40Q8WUR7 153 aa2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 ZNF317Q96PQ6 595 aaPredicted RBP2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 TMEM38AQ9H6F2 299 aa2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 AUNIPQ9H7T9 357 aa2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 PDP1Q9P0J1 537 aaPredicted RBP2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 MTFP1Q9UDX5 166 aa2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 TBC1D24Q9ULP9 559 aa2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 TMEM14AQ9Y6G1 99 aa2.78□□□□□ -1.96
SMCHD1-205ENST00000581383 ADAMTS13Q76LX8 1427 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 GAKO14976 1311 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 WDR19Q8NEZ3 1342 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 KCNE1BA0A087WTH5 132 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 ZNF705GA8MUZ8 300 aaPredicted RBP2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 H7C1H1 209 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 M0R3G1 203 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 RAD51BO15315 384 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 VAMP5O95183 116 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 HBE1P02100 147 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 OR56A5P0C7T3 313 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 CTRB1P17538 263 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 IL32P24001 234 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 RPS23P62266 143 aaKnown RBP2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 LOXL1Q08397 574 aaPredicted RBP2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 IFT88Q13099 833 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 DGCR6Q14129 220 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 ZNF684Q5T5D7 378 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 WDR86Q86TI4 376 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 CBLN2Q8IUK8 224 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 KATNAL2Q8IYT4 538 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 CBR4Q8N4T8 237 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 JAGN1Q8N5M9 183 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 COX18Q8N8Q8 333 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 C11orf72Q8NBR9 251 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 OR56A4Q8NGH8 313 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 OR8U1Q8NH10 309 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 OR52E5Q8NH55 327 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 AGR3Q8TD06 166 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 NEURL3Q96EH8 262 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 FOXC2Q99958 501 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 LZTS2Q9BRK4 669 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 NTN4Q9HB63 628 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 DDX19AQ9NUU7 478 aaKnown RBP2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 RABL2AQ9UBK7 228 aaPredicted RBP2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 HYOU1Q9Y4L1 999 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 COL22A1Q8NFW1 1626 aaPredicted RBP2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 SLIT3O75094 1523 aa2.77□□□□□ -1.97
SMCHD1-205ENST00000581383 TMEM223A0PJW6 202 aa2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 NVLO15381 856 aaKnown RBP2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 RBFOX2O43251 390 aaKnown RBP eCLIP2.76□□□□□ -1.97
SMCHD1-205ENST00000581383 GCM2O75603 506 aaPredicted RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms