RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 MDP1Q86V88 176 aa9.15□□□□□ -0.94
TOP3A-210ENST00000580713 C8orf59Q8N0T1 100 aaPredicted RBP9.15□□□□□ -0.94
TOP3A-210ENST00000580713 IQCF1Q8N6M8 205 aa9.15□□□□□ -0.94
TOP3A-210ENST00000580713 SETD9Q8NE22 299 aa9.15□□□□□ -0.94
TOP3A-210ENST00000580713 OR8D4Q8NGM9 314 aa9.15□□□□□ -0.94
TOP3A-210ENST00000580713 OR5J2Q8NH18 312 aa9.15□□□□□ -0.94
TOP3A-210ENST00000580713 UBE2FQ969M7 185 aa9.15□□□□□ -0.94
TOP3A-210ENST00000580713 ASPNQ9BXN1 380 aa9.15□□□□□ -0.94
TOP3A-210ENST00000580713 TEX12Q9BXU0 123 aa9.15□□□□□ -0.94
TOP3A-210ENST00000580713 NDEL1Q9GZM8 345 aa9.15□□□□□ -0.94
TOP3A-210ENST00000580713 MMP27Q9H306 513 aa9.15□□□□□ -0.94
TOP3A-210ENST00000580713 NELFAQ9H3P2 528 aa9.15□□□□□ -0.94
TOP3A-210ENST00000580713 SLC25A19Q9HC21 320 aa9.15□□□□□ -0.94
TOP3A-210ENST00000580713 OPN4Q9UHM6 478 aa9.15□□□□□ -0.94
TOP3A-210ENST00000580713 DUSP13Q9UII6 198 aa9.15□□□□□ -0.94
TOP3A-210ENST00000580713 HIF3AQ9Y2N7 669 aa9.15□□□□□ -0.94
TOP3A-210ENST00000580713 A0A1W2PPW3 197 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 LIPT2A6NK58 231 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 M0QZ24 198 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 M0R082 166 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 RP2O75695 350 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 OR6A2O95222 327 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 KNG1P01042 644 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 FSHBP01225 129 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 RNASE1P07998 156 aaKnown RBP9.14□□□□□ -0.95
TOP3A-210ENST00000580713 NAT2P11245 290 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 SLC6A6P31641 620 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 AQP2P41181 271 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 GIPRP48546 466 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 LCN2P80188 198 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 CDK5Q00535 292 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 IL5RAQ01344 420 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 PMS2P3Q13401 168 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 SAMD5Q5TGI4 173 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 THAP5Q7Z6K1 395 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 LRP11Q86VZ4 500 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 SCAIQ8N9R8 606 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 SYT14Q8NB59 555 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 OR2T33Q8NG76 320 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 ZNF417Q8TAU3 575 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 FAM81AQ8TBF8 368 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 TMIGD2Q96BF3 282 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 ZNF587Q96SQ5 575 aaPredicted RBP9.14□□□□□ -0.95
TOP3A-210ENST00000580713 IFT27Q9BW83 186 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 PRRG3Q9BZD7 231 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 IMPAD1Q9NX62 359 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 MRPL39Q9NYK5 338 aaKnown RBP9.14□□□□□ -0.95
TOP3A-210ENST00000580713 MYEF2Q9P2K5 600 aaKnown RBP9.14□□□□□ -0.95
TOP3A-210ENST00000580713 ZNF69Q9UC07 566 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 IL20RAQ9UHF4 553 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 NUP50Q9UKX7 468 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 ZNF346Q9UL40 294 aaKnown RBP9.14□□□□□ -0.95
TOP3A-210ENST00000580713 HSPE1-MOB4S4R3N1 261 aa9.14□□□□□ -0.95
TOP3A-210ENST00000580713 AQP7P3A6NL99 342 aa9.13□□□□□ -0.95
TOP3A-210ENST00000580713 TPD52L2O43399 206 aaKnown RBP9.13□□□□□ -0.95
TOP3A-210ENST00000580713 FZD7O75084 574 aa9.13□□□□□ -0.95
TOP3A-210ENST00000580713 IGHV2-5P01817 119 aa9.13□□□□□ -0.95
TOP3A-210ENST00000580713 HMGN1P05114 100 aa9.13□□□□□ -0.95
TOP3A-210ENST00000580713 TSPAN19P0C672 248 aa9.13□□□□□ -0.95
TOP3A-210ENST00000580713 ADORA3P0DMS8 318 aa9.13□□□□□ -0.95
TOP3A-210ENST00000580713 CD79AP11912 226 aa9.13□□□□□ -0.95
TOP3A-210ENST00000580713 GRK5P34947 590 aa9.13□□□□□ -0.95
TOP3A-210ENST00000580713 GLRXP35754 106 aa9.13□□□□□ -0.95
TOP3A-210ENST00000580713 RPL4P36578 427 aaKnown RBP9.13□□□□□ -0.95
TOP3A-210ENST00000580713 MAGEB1P43366 347 aa9.13□□□□□ -0.95
TOP3A-210ENST00000580713 ISL1P61371 349 aa9.13□□□□□ -0.95
TOP3A-210ENST00000580713 RPS23P62266 143 aaKnown RBP9.13□□□□□ -0.95
TOP3A-210ENST00000580713 GALK2Q01415 458 aa9.13□□□□□ -0.95
TOP3A-210ENST00000580713 RPL18Q07020 188 aaKnown RBP9.13□□□□□ -0.95
TOP3A-210ENST00000580713 NKPD1Q17RQ9 610 aa9.13□□□□□ -0.95
TOP3A-210ENST00000580713 ALG10Q5BKT4 473 aa9.13□□□□□ -0.95
TOP3A-210ENST00000580713 C12orf73Q69YU5 71 aa9.13□□□□□ -0.95
TOP3A-210ENST00000580713 CREB3L2Q70SY1 520 aa9.13□□□□□ -0.95
TOP3A-210ENST00000580713 H1FNTQ75WM6 255 aaPredicted RBP9.13□□□□□ -0.95
TOP3A-210ENST00000580713 SPATC1Q76KD6 591 aa9.13□□□□□ -0.95
TOP3A-210ENST00000580713 WDFY1Q8IWB7 410 aa9.13□□□□□ -0.95
TOP3A-210ENST00000580713 BCL6BQ8N143 479 aaPredicted RBP9.13□□□□□ -0.95
TOP3A-210ENST00000580713 OR4Q3Q8NH05 313 aa9.13□□□□□ -0.95
TOP3A-210ENST00000580713 MOSPD2Q8NHP6 518 aa9.13□□□□□ -0.95
TOP3A-210ENST00000580713 C1orf147Q96MC9 270 aaPredicted RBP9.13□□□□□ -0.95
TOP3A-210ENST00000580713 TVP23BQ9NYZ1 205 aa9.13□□□□□ -0.95
TOP3A-210ENST00000580713 UBAP1Q9NZ09 502 aa9.13□□□□□ -0.95
TOP3A-210ENST00000580713 SEC14L4Q9UDX3 406 aa9.13□□□□□ -0.95
TOP3A-210ENST00000580713 BAIAP2Q9UQB8 552 aa9.13□□□□□ -0.95
TOP3A-210ENST00000580713 ZNF503-AS2A6NEH8 195 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 MCIDASD6RGH6 385 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 C11orf98E9PRG8 122 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 PLPP3O14495 311 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 BHLHE40O14503 412 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 TIMM23O14925 209 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 RNF13O43567 381 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 MPZL2O60487 215 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 SEC14L2O76054 403 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 ZNF432O94892 652 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 PPP1R3DO95685 299 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 CD14P08571 375 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 AHCYP23526 432 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 CTXN1P60606 82 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 CCL8P80075 99 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 TEKQ02763 1124 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms