RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 MRPL24Q96A35 216 aaKnown RBP13.24□□□□□ -0.29
IFT20-208ENST00000578985 RDH12Q96NR8 316 aa13.24□□□□□ -0.29
IFT20-208ENST00000578985 ATF6BQ99941 703 aa13.24□□□□□ -0.29
IFT20-208ENST00000578985 CACNG6Q9BXT2 260 aa13.24□□□□□ -0.29
IFT20-208ENST00000578985 MRPL37Q9BZE1 423 aaKnown RBP13.24□□□□□ -0.29
IFT20-208ENST00000578985 PLK3Q9H4B4 646 aa13.24□□□□□ -0.29
IFT20-208ENST00000578985 ZNF701Q9NV72 531 aaPredicted RBP13.24□□□□□ -0.29
IFT20-208ENST00000578985 TBCCD1Q9NVR7 557 aa13.24□□□□□ -0.29
IFT20-208ENST00000578985 FAM118AQ9NWS6 357 aa13.24□□□□□ -0.29
IFT20-208ENST00000578985 SMPD3Q9NY59 655 aaPredicted RBP13.24□□□□□ -0.29
IFT20-208ENST00000578985 NKX1-2Q9UD57 310 aaPredicted RBP13.24□□□□□ -0.29
IFT20-208ENST00000578985 FZR1Q9UM11 496 aa13.24□□□□□ -0.29
IFT20-208ENST00000578985 GMPPBQ9Y5P6 360 aa13.24□□□□□ -0.29
IFT20-208ENST00000578985 PDZD2O15018 2839 aa13.23□□□□□ -0.29
IFT20-208ENST00000578985 PRRC2AP48634 2157 aaKnown RBP13.23□□□□□ -0.29
IFT20-208ENST00000578985 TMEM129A0AVI4 362 aa13.23□□□□□ -0.29
IFT20-208ENST00000578985 CASQ2O14958 399 aaPredicted RBP13.23□□□□□ -0.29
IFT20-208ENST00000578985 NGFP01138 241 aa13.23□□□□□ -0.29
IFT20-208ENST00000578985 BMP4P12644 408 aa13.23□□□□□ -0.29
IFT20-208ENST00000578985 PAX1P15863 534 aa13.23□□□□□ -0.29
IFT20-208ENST00000578985 NAA10P41227 235 aaPredicted RBP13.23□□□□□ -0.29
IFT20-208ENST00000578985 PTH2RP49190 550 aa13.23□□□□□ -0.29
IFT20-208ENST00000578985 EVX1P49640 407 aa13.23□□□□□ -0.29
IFT20-208ENST00000578985 SNRPD2P62316 118 aaKnown RBP13.23□□□□□ -0.29
IFT20-208ENST00000578985 TAF13Q15543 124 aa13.23□□□□□ -0.29
IFT20-208ENST00000578985 KRTAP27-1Q3LI81 207 aa13.23□□□□□ -0.29
IFT20-208ENST00000578985 OGFRL1Q5TC84 451 aaPredicted RBP13.23□□□□□ -0.29
IFT20-208ENST00000578985 SLC16A9Q7RTY1 509 aa13.23□□□□□ -0.29
IFT20-208ENST00000578985 C1orf174Q8IYL3 243 aa13.23□□□□□ -0.29
IFT20-208ENST00000578985 ZNF454Q8N9F8 522 aa13.23□□□□□ -0.29
IFT20-208ENST00000578985 ST7LQ8TDW4 575 aa13.23□□□□□ -0.29
IFT20-208ENST00000578985 TRUB1Q8WWH5 349 aaKnown RBP13.23□□□□□ -0.29
IFT20-208ENST00000578985 IPCEF1Q8WWN9 437 aaPredicted RBP13.23□□□□□ -0.29
IFT20-208ENST00000578985 UBE2FQ969M7 185 aa13.23□□□□□ -0.29
IFT20-208ENST00000578985 SLAMF6Q96DU3 332 aa13.23□□□□□ -0.29
IFT20-208ENST00000578985 TRMT61AQ96FX7 289 aaKnown RBP13.23□□□□□ -0.29
IFT20-208ENST00000578985 PERPQ96FX8 193 aa13.23□□□□□ -0.29
IFT20-208ENST00000578985 DOK1Q99704 481 aa13.23□□□□□ -0.29
IFT20-208ENST00000578985 SYT3Q9BQG1 590 aa13.23□□□□□ -0.29
IFT20-208ENST00000578985 ABHD6Q9BV23 337 aa13.23□□□□□ -0.29
IFT20-208ENST00000578985 GSX2Q9BZM3 304 aa13.23□□□□□ -0.29
IFT20-208ENST00000578985 CENPMQ9NSP4 180 aa13.23□□□□□ -0.29
IFT20-208ENST00000578985 DDX28Q9NUL7 540 aaKnown RBP13.23□□□□□ -0.29
IFT20-208ENST00000578985 DNAJC27Q9NZQ0 273 aa13.23□□□□□ -0.29
IFT20-208ENST00000578985 DUSP13Q9UII6 198 aa13.23□□□□□ -0.29
IFT20-208ENST00000578985 PMF1-BGLAPU3KQ54 211 aa13.23□□□□□ -0.29
IFT20-208ENST00000578985 LOC100130705A0A1B0GUX0 176 aa13.22□□□□□ -0.29
IFT20-208ENST00000578985 SLC22A31A6NKX4 558 aa13.22□□□□□ -0.29
IFT20-208ENST00000578985 F5H5K5 113 aa13.22□□□□□ -0.29
IFT20-208ENST00000578985 DLGAP1O14490 977 aa13.22□□□□□ -0.29
IFT20-208ENST00000578985 ZNF250P15622 560 aa13.22□□□□□ -0.29
IFT20-208ENST00000578985 RGS6P49758 472 aa13.22□□□□□ -0.29
IFT20-208ENST00000578985 ATP5J2P56134 94 aa13.22□□□□□ -0.29
IFT20-208ENST00000578985 SELENOVP59797 346 aa13.22□□□□□ -0.29
IFT20-208ENST00000578985 SNRPGP62308 76 aaKnown RBP13.22□□□□□ -0.29
IFT20-208ENST00000578985 SLC34A1Q06495 639 aa13.22□□□□□ -0.29
IFT20-208ENST00000578985 ZNF718Q3SXZ3 478 aa13.22□□□□□ -0.29
IFT20-208ENST00000578985 SPATA46Q5T0L3 261 aa13.22□□□□□ -0.29
IFT20-208ENST00000578985 SPATC1Q76KD6 591 aa13.22□□□□□ -0.29
IFT20-208ENST00000578985 LRP11Q86VZ4 500 aa13.22□□□□□ -0.29
IFT20-208ENST00000578985 LRRC75A-AS1Q8N1F1 130 aa13.22□□□□□ -0.29
IFT20-208ENST00000578985 ZNF555Q8NEP9 628 aa13.22□□□□□ -0.29
IFT20-208ENST00000578985 OTOSQ8NHW6 89 aa13.22□□□□□ -0.29
IFT20-208ENST00000578985 SYNPRQ8TBG9 265 aa13.22□□□□□ -0.29
IFT20-208ENST00000578985 SLC25A40Q8TBP6 338 aa13.22□□□□□ -0.29
IFT20-208ENST00000578985 SPTSSAQ969W0 71 aa13.22□□□□□ -0.29
IFT20-208ENST00000578985 ZNF582Q96NG8 517 aaPredicted RBP13.22□□□□□ -0.29
IFT20-208ENST00000578985 COPS4Q9BT78 406 aa13.22□□□□□ -0.29
IFT20-208ENST00000578985 YIPF3Q9GZM5 350 aa13.22□□□□□ -0.29
IFT20-208ENST00000578985 RNPEPL1Q9HAU8 725 aa13.22□□□□□ -0.29
IFT20-208ENST00000578985 FBXO9Q9UK97 447 aaPredicted RBP13.22□□□□□ -0.29
IFT20-208ENST00000578985 ZNF878C9JN71 531 aa13.21□□□□□ -0.29
IFT20-208ENST00000578985 SLC16A6O15403 523 aa13.21□□□□□ -0.29
IFT20-208ENST00000578985 MRPL3P09001 348 aaKnown RBP13.21□□□□□ -0.29
IFT20-208ENST00000578985 ACSM4P0C7M7 580 aa13.21□□□□□ -0.29
IFT20-208ENST00000578985 HTR1FP30939 366 aa13.21□□□□□ -0.29
IFT20-208ENST00000578985 NUDT6P53370 316 aa13.21□□□□□ -0.29
IFT20-208ENST00000578985 TPTEP56180 551 aa13.21□□□□□ -0.29
IFT20-208ENST00000578985 GGTLC2Q14390 218 aa13.21□□□□□ -0.29
IFT20-208ENST00000578985 THEM6Q8WUY1 208 aa13.21□□□□□ -0.29
IFT20-208ENST00000578985 RNF133Q8WVZ7 376 aa13.21□□□□□ -0.29
IFT20-208ENST00000578985 APOBEC3DQ96AK3 386 aaPredicted RBP13.21□□□□□ -0.29
IFT20-208ENST00000578985 MARS2Q96GW9 593 aaKnown RBP13.21□□□□□ -0.29
IFT20-208ENST00000578985 COG8Q96MW5 612 aa13.21□□□□□ -0.29
IFT20-208ENST00000578985 AMELYQ99218 206 aa13.21□□□□□ -0.29
IFT20-208ENST00000578985 CNN2Q99439 309 aaKnown RBP13.21□□□□□ -0.29
IFT20-208ENST00000578985 OR2J1Q9GZK6 312 aa13.21□□□□□ -0.29
IFT20-208ENST00000578985 CXXC4Q9H2H0 198 aa13.21□□□□□ -0.29
IFT20-208ENST00000578985 HAO2Q9NYQ3 351 aa13.21□□□□□ -0.29
IFT20-208ENST00000578985 MYEF2Q9P2K5 600 aaKnown RBP13.21□□□□□ -0.29
IFT20-208ENST00000578985 WARS2Q9UGM6 360 aaKnown RBP13.21□□□□□ -0.29
IFT20-208ENST00000578985 STARD10Q9Y365 291 aa13.21□□□□□ -0.29
IFT20-208ENST00000578985 A0A1W2PPW3 197 aa13.2□□□□□ -0.3
IFT20-208ENST00000578985 H3BSA7 217 aa13.2□□□□□ -0.3
IFT20-208ENST00000578985 H7C417 338 aa13.2□□□□□ -0.3
IFT20-208ENST00000578985 J3QW42 95 aa13.2□□□□□ -0.3
IFT20-208ENST00000578985 M0R135 149 aa13.2□□□□□ -0.3
IFT20-208ENST00000578985 CLPTM1O96005 669 aa13.2□□□□□ -0.3
IFT20-208ENST00000578985 LYNP07948 512 aa13.2□□□□□ -0.3
IFT20-208ENST00000578985 ALOX5APP20292 161 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms