RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 PTGES3Q15185 160 aaKnown RBP16.53■□□□□ 0.24
SS18-208ENST00000577751 MOGQ16653 247 aa16.53■□□□□ 0.24
SS18-208ENST00000577751 SPATA46Q5T0L3 261 aa16.53■□□□□ 0.24
SS18-208ENST00000577751 ZFP1Q6P2D0 407 aa16.53■□□□□ 0.24
SS18-208ENST00000577751 C10orf105Q8TEF2 133 aa16.53■□□□□ 0.24
SS18-208ENST00000577751 IPCEF1Q8WWN9 437 aaPredicted RBP16.53■□□□□ 0.24
SS18-208ENST00000577751 FAM168AQ92567 244 aa16.53■□□□□ 0.24
SS18-208ENST00000577751 SMR3AQ99954 134 aa16.53■□□□□ 0.24
SS18-208ENST00000577751 SEMA6AQ9H2E6 1030 aa16.53■□□□□ 0.24
SS18-208ENST00000577751 TPK1Q9H3S4 243 aa16.53■□□□□ 0.24
SS18-208ENST00000577751 GSX1Q9H4S2 264 aaPredicted RBP16.53■□□□□ 0.24
SS18-208ENST00000577751 KRT84Q9NSB2 600 aa16.53■□□□□ 0.24
SS18-208ENST00000577751 GPR160Q9UJ42 338 aa16.53■□□□□ 0.24
SS18-208ENST00000577751 CR1P17927 2039 aa16.53■□□□□ 0.24
SS18-208ENST00000577751 A0A096LNT2 108 aa16.52■□□□□ 0.24
SS18-208ENST00000577751 PRR23D1E9PI22 279 aaPredicted RBP16.52■□□□□ 0.24
SS18-208ENST00000577751 MITFO75030 526 aaPredicted RBP16.52■□□□□ 0.24
SS18-208ENST00000577751 GLCEO94923 617 aa16.52■□□□□ 0.24
SS18-208ENST00000577751 PRR23D2P0DMB1 279 aaPredicted RBP16.52■□□□□ 0.24
SS18-208ENST00000577751 NAT2P11245 290 aa16.52■□□□□ 0.24
SS18-208ENST00000577751 PAICSP22234 425 aaKnown RBP16.52■□□□□ 0.24
SS18-208ENST00000577751 GCH1P30793 250 aa16.52■□□□□ 0.24
SS18-208ENST00000577751 RPS27P42677 84 aaKnown RBP16.52■□□□□ 0.24
SS18-208ENST00000577751 ECH1Q13011 328 aa16.52■□□□□ 0.24
SS18-208ENST00000577751 COLCA1Q6ZS62 124 aa16.52■□□□□ 0.24
SS18-208ENST00000577751 OR10S1Q8NGN2 331 aa16.52■□□□□ 0.24
SS18-208ENST00000577751 COG8Q96MW5 612 aa16.52■□□□□ 0.24
SS18-208ENST00000577751 PITX2Q99697 317 aa16.52■□□□□ 0.24
SS18-208ENST00000577751 ATF6BQ99941 703 aa16.52■□□□□ 0.24
SS18-208ENST00000577751 POFUT1Q9H488 388 aa16.52■□□□□ 0.24
SS18-208ENST00000577751 MARCH7Q9H992 704 aa16.52■□□□□ 0.24
SS18-208ENST00000577751 HINT3Q9NQE9 182 aaKnown RBP16.52■□□□□ 0.24
SS18-208ENST00000577751 TMEFF2Q9UIK5 374 aaPredicted RBP16.52■□□□□ 0.24
SS18-208ENST00000577751 OAZ3Q9UMX2 235 aa16.52■□□□□ 0.24
SS18-208ENST00000577751 STARD10Q9Y365 291 aa16.52■□□□□ 0.24
SS18-208ENST00000577751 LOC390937A0A1W2PQ73 354 aa16.51■□□□□ 0.23
SS18-208ENST00000577751 C17orf100A8MU93 164 aa16.51■□□□□ 0.23
SS18-208ENST00000577751 VWC2LB2RUY7 222 aa16.51■□□□□ 0.23
SS18-208ENST00000577751 NDUFS8O00217 210 aa16.51■□□□□ 0.23
SS18-208ENST00000577751 ZNF593O00488 134 aaPredicted RBP16.51■□□□□ 0.23
SS18-208ENST00000577751 SMAD7O15105 426 aaKnown RBP16.51■□□□□ 0.23
SS18-208ENST00000577751 RGS6P49758 472 aa16.51■□□□□ 0.23
SS18-208ENST00000577751 ENTPD1P49961 510 aa16.51■□□□□ 0.23
SS18-208ENST00000577751 PDLIM4P50479 330 aa16.51■□□□□ 0.23
SS18-208ENST00000577751 MMP15P51511 669 aa16.51■□□□□ 0.23
SS18-208ENST00000577751 PPP2R2BQ00005 443 aa16.51■□□□□ 0.23
SS18-208ENST00000577751 NKPD1Q17RQ9 610 aa16.51■□□□□ 0.23
SS18-208ENST00000577751 ALKBH6Q3KRA9 238 aa16.51■□□□□ 0.23
SS18-208ENST00000577751 PLBD1Q6P4A8 553 aa16.51■□□□□ 0.23
SS18-208ENST00000577751 C10orf67Q8IYJ2 551 aa16.51■□□□□ 0.23
SS18-208ENST00000577751 OR6K6Q8NGW6 343 aa16.51■□□□□ 0.23
SS18-208ENST00000577751 RAB3IPQ96QF0 476 aaPredicted RBP16.51■□□□□ 0.23
SS18-208ENST00000577751 PKP2Q99959 881 aa16.51■□□□□ 0.23
SS18-208ENST00000577751 TEX12Q9BXU0 123 aa16.51■□□□□ 0.23
SS18-208ENST00000577751 DDX28Q9NUL7 540 aaKnown RBP16.51■□□□□ 0.23
SS18-208ENST00000577751 PRODHO43272 600 aa16.5■□□□□ 0.23
SS18-208ENST00000577751 ACSM4P0C7M7 580 aa16.5■□□□□ 0.23
SS18-208ENST00000577751 DAOP14920 347 aa16.5■□□□□ 0.23
SS18-208ENST00000577751 SLC25A16P16260 332 aa16.5■□□□□ 0.23
SS18-208ENST00000577751 PSG7Q13046 419 aa16.5■□□□□ 0.23
SS18-208ENST00000577751 TMEM154Q6P9G4 183 aa16.5■□□□□ 0.23
SS18-208ENST00000577751 DCXRQ7Z4W1 244 aa16.5■□□□□ 0.23
SS18-208ENST00000577751 CPOQ8IVL8 374 aa16.5■□□□□ 0.23
SS18-208ENST00000577751 TIGD4Q8IY51 512 aa16.5■□□□□ 0.23
SS18-208ENST00000577751 ZNF786Q8N393 782 aa16.5■□□□□ 0.23
SS18-208ENST00000577751 UBASH3BQ8TF42 649 aa16.5■□□□□ 0.23
SS18-208ENST00000577751 APOBEC3DQ96AK3 386 aaPredicted RBP16.5■□□□□ 0.23
SS18-208ENST00000577751 OTULINQ96BN8 352 aa16.5■□□□□ 0.23
SS18-208ENST00000577751 CIB1Q99828 191 aa16.5■□□□□ 0.23
SS18-208ENST00000577751 OSBPL10Q9BXB5 764 aa16.5■□□□□ 0.23
SS18-208ENST00000577751 OR51V1Q9H2C8 321 aa16.5■□□□□ 0.23
SS18-208ENST00000577751 NKIRAS2Q9NYR9 191 aa16.5■□□□□ 0.23
SS18-208ENST00000577751 TVP23BQ9NYZ1 205 aa16.5■□□□□ 0.23
SS18-208ENST00000577751 ZAR1LA6NP61 321 aa16.49■□□□□ 0.23
SS18-208ENST00000577751 HPXP02790 462 aa16.49■□□□□ 0.23
SS18-208ENST00000577751 SPARCP09486 303 aa16.49■□□□□ 0.23
SS18-208ENST00000577751 SLC2A5P22732 501 aa16.49■□□□□ 0.23
SS18-208ENST00000577751 EPHA2P29317 976 aa16.49■□□□□ 0.23
SS18-208ENST00000577751 GSTT1P30711 240 aa16.49■□□□□ 0.23
SS18-208ENST00000577751 OTX1P32242 354 aaPredicted RBP16.49■□□□□ 0.23
SS18-208ENST00000577751 LIPAP38571 399 aa16.49■□□□□ 0.23
SS18-208ENST00000577751 EFNB1P98172 346 aa16.49■□□□□ 0.23
SS18-208ENST00000577751 SNAPC1Q16533 368 aa16.49■□□□□ 0.23
SS18-208ENST00000577751 SLX4IPQ5VYV7 408 aa16.49■□□□□ 0.23
SS18-208ENST00000577751 MAPK1IP1LQ8NDC0 245 aa16.49■□□□□ 0.23
SS18-208ENST00000577751 ST7LQ8TDW4 575 aa16.49■□□□□ 0.23
SS18-208ENST00000577751 SNX33Q8WV41 574 aa16.49■□□□□ 0.23
SS18-208ENST00000577751 HAVCR1Q96D42 359 aa16.49■□□□□ 0.23
SS18-208ENST00000577751 PLEKHA8Q96JA3 519 aa16.49■□□□□ 0.23
SS18-208ENST00000577751 C1QTNF5Q9BXJ0 243 aa16.49■□□□□ 0.23
SS18-208ENST00000577751 CGGBP1Q9UFW8 167 aaPredicted RBP16.49■□□□□ 0.23
SS18-208ENST00000577751 ENOPH1Q9UHY7 261 aa16.49■□□□□ 0.23
SS18-208ENST00000577751 YLPM1P49750 1951 aaKnown RBP16.49■□□□□ 0.23
SS18-208ENST00000577751 LY6G6DO95868 133 aa16.48■□□□□ 0.23
SS18-208ENST00000577751 KITLGP21583 273 aa16.48■□□□□ 0.23
SS18-208ENST00000577751 IGFBP5P24593 272 aa16.48■□□□□ 0.23
SS18-208ENST00000577751 GIFP27352 417 aa16.48■□□□□ 0.23
SS18-208ENST00000577751 MAGEB1P43366 347 aa16.48■□□□□ 0.23
SS18-208ENST00000577751 LOXL1Q08397 574 aaPredicted RBP16.48■□□□□ 0.23
SS18-208ENST00000577751 PCGF3Q3KNV8 242 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms