RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 KLF14Q8TD94 323 aaPredicted RBP13.44□□□□□ -0.26
NCBP3-207ENST00000577169 NEU4Q8WWR8 484 aaPredicted RBP13.44□□□□□ -0.26
NCBP3-207ENST00000577169 C18orf12Q96KH6 178 aa13.44□□□□□ -0.26
NCBP3-207ENST00000577169 DCLRE1CQ96SD1 692 aaKnown RBP13.44□□□□□ -0.26
NCBP3-207ENST00000577169 RHNO1Q9BSD3 238 aa13.44□□□□□ -0.26
NCBP3-207ENST00000577169 TPK1Q9H3S4 243 aa13.44□□□□□ -0.26
NCBP3-207ENST00000577169 POFUT1Q9H488 388 aa13.44□□□□□ -0.26
NCBP3-207ENST00000577169 PNRC2Q9NPJ4 139 aaKnown RBP13.44□□□□□ -0.26
NCBP3-207ENST00000577169 SLCO1C1Q9NYB5 712 aa13.44□□□□□ -0.26
NCBP3-207ENST00000577169 ATPIF1Q9UII2 106 aa13.44□□□□□ -0.26
NCBP3-207ENST00000577169 ZAR1LA6NP61 321 aa13.43□□□□□ -0.26
NCBP3-207ENST00000577169 F5H5K5 113 aa13.43□□□□□ -0.26
NCBP3-207ENST00000577169 SMAD7O15105 426 aaKnown RBP13.43□□□□□ -0.26
NCBP3-207ENST00000577169 SPARCP09486 303 aa13.43□□□□□ -0.26
NCBP3-207ENST00000577169 NAT2P11245 290 aa13.43□□□□□ -0.26
NCBP3-207ENST00000577169 IGFBP5P24593 272 aa13.43□□□□□ -0.26
NCBP3-207ENST00000577169 POLR2IP36954 125 aaKnown RBP13.43□□□□□ -0.26
NCBP3-207ENST00000577169 DSCR9P59020 149 aa13.43□□□□□ -0.26
NCBP3-207ENST00000577169 PPP2R2BQ00005 443 aa13.43□□□□□ -0.26
NCBP3-207ENST00000577169 ECH1Q13011 328 aa13.43□□□□□ -0.26
NCBP3-207ENST00000577169 MOGQ16653 247 aa13.43□□□□□ -0.26
NCBP3-207ENST00000577169 PCK2Q16822 640 aa13.43□□□□□ -0.26
NCBP3-207ENST00000577169 NKPD1Q17RQ9 610 aa13.43□□□□□ -0.26
NCBP3-207ENST00000577169 KRTAP27-1Q3LI81 207 aa13.43□□□□□ -0.26
NCBP3-207ENST00000577169 KLHL12Q53G59 568 aa13.43□□□□□ -0.26
NCBP3-207ENST00000577169 TMEM255AQ5JRV8 349 aa13.43□□□□□ -0.26
NCBP3-207ENST00000577169 SLX4IPQ5VYV7 408 aa13.43□□□□□ -0.26
NCBP3-207ENST00000577169 MBNL2Q5VZF2 373 aaKnown RBP13.43□□□□□ -0.26
NCBP3-207ENST00000577169 CLEC2AQ6UVW9 174 aa13.43□□□□□ -0.26
NCBP3-207ENST00000577169 CXXC5Q7LFL8 322 aaKnown RBP13.43□□□□□ -0.26
NCBP3-207ENST00000577169 DCXRQ7Z4W1 244 aa13.43□□□□□ -0.26
NCBP3-207ENST00000577169 NAA40Q86UY6 237 aa13.43□□□□□ -0.26
NCBP3-207ENST00000577169 BBS1Q8NFJ9 593 aa13.43□□□□□ -0.26
NCBP3-207ENST00000577169 ZMYND19Q96E35 227 aaPredicted RBP13.43□□□□□ -0.26
NCBP3-207ENST00000577169 CIB1Q99828 191 aa13.43□□□□□ -0.26
NCBP3-207ENST00000577169 ATF6BQ99941 703 aa13.43□□□□□ -0.26
NCBP3-207ENST00000577169 MARCH7Q9H992 704 aa13.43□□□□□ -0.26
NCBP3-207ENST00000577169 GPR160Q9UJ42 338 aa13.43□□□□□ -0.26
NCBP3-207ENST00000577169 IGHV4-30-2A0A087WSY4 118 aa13.42□□□□□ -0.26
NCBP3-207ENST00000577169 RNF223E7ERA6 249 aa13.42□□□□□ -0.26
NCBP3-207ENST00000577169 PRKYO43930 277 aa13.42□□□□□ -0.26
NCBP3-207ENST00000577169 ERCC1P07992 297 aaPredicted RBP13.42□□□□□ -0.26
NCBP3-207ENST00000577169 INHBBP09529 407 aa13.42□□□□□ -0.26
NCBP3-207ENST00000577169 TUBG1P23258 451 aa13.42□□□□□ -0.26
NCBP3-207ENST00000577169 ERI1Q8IV48 349 aaKnown RBP13.42□□□□□ -0.26
NCBP3-207ENST00000577169 TIGD4Q8IY51 512 aa13.42□□□□□ -0.26
NCBP3-207ENST00000577169 IPCEF1Q8WWN9 437 aaPredicted RBP13.42□□□□□ -0.26
NCBP3-207ENST00000577169 FAM168AQ92567 244 aa13.42□□□□□ -0.26
NCBP3-207ENST00000577169 CMBLQ96DG6 245 aa13.42□□□□□ -0.26
NCBP3-207ENST00000577169 INTS14Q96SY0 518 aa13.42□□□□□ -0.26
NCBP3-207ENST00000577169 RBM4BQ9BQ04 359 aaKnown RBP13.42□□□□□ -0.26
NCBP3-207ENST00000577169 REG4Q9BYZ8 158 aa13.42□□□□□ -0.26
NCBP3-207ENST00000577169 GSX1Q9H4S2 264 aaPredicted RBP13.42□□□□□ -0.26
NCBP3-207ENST00000577169 TUBG2Q9NRH3 451 aa13.42□□□□□ -0.26
NCBP3-207ENST00000577169 CENPMQ9NSP4 180 aa13.42□□□□□ -0.26
NCBP3-207ENST00000577169 CHD3Q12873 2000 aaKnown RBP13.42□□□□□ -0.26
NCBP3-207ENST00000577169 ITPR3Q14573 2671 aa13.42□□□□□ -0.26
NCBP3-207ENST00000577169 AKAP9Q99996 3911 aa13.42□□□□□ -0.26
NCBP3-207ENST00000577169 TLX2O43763 284 aaPredicted RBP13.41□□□□□ -0.26
NCBP3-207ENST00000577169 ACSM4P0C7M7 580 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 DAOP14920 347 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 SLC2A5P22732 501 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 RGS6P49758 472 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 PDLIM4P50479 330 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 EFNB1P98172 346 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 PSG7Q13046 419 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 APOFQ13790 326 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 EIF2B1Q14232 305 aaKnown RBP13.41□□□□□ -0.26
NCBP3-207ENST00000577169 CARTPTQ16568 116 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 SLC35D3Q5M8T2 416 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 C12orf73Q69YU5 71 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 SHFQ7M4L6 423 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 DPY19L4Q7Z388 723 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 TCEANCQ8N8B7 351 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 MAPK1IP1LQ8NDC0 245 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 OR6N2Q8NGY6 317 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 C10orf105Q8TEF2 133 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 UBASH3BQ8TF42 649 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 GTF3AQ92664 365 aaKnown RBP13.41□□□□□ -0.26
NCBP3-207ENST00000577169 APOBEC3DQ96AK3 386 aaPredicted RBP13.41□□□□□ -0.26
NCBP3-207ENST00000577169 HAVCR1Q96D42 359 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 SLAMF6Q96DU3 332 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 COX4I2Q96KJ9 171 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 COG8Q96MW5 612 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 TEAD3Q99594 435 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 SMR3AQ99954 134 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 RIBC2Q9H4K1 309 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 PTTG3PQ9NZH4 202 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 ENOPH1Q9UHY7 261 aa13.41□□□□□ -0.26
NCBP3-207ENST00000577169 C17orf100A8MU93 164 aa13.4□□□□□ -0.26
NCBP3-207ENST00000577169 ANKRD65E5RJM6 399 aa13.4□□□□□ -0.26
NCBP3-207ENST00000577169 LYNX1G3V0Z9 82 aa13.4□□□□□ -0.26
NCBP3-207ENST00000577169 H3BSA7 217 aa13.4□□□□□ -0.26
NCBP3-207ENST00000577169 M0R129 80 aa13.4□□□□□ -0.26
NCBP3-207ENST00000577169 PRODHO43272 600 aa13.4□□□□□ -0.26
NCBP3-207ENST00000577169 BAG2O95816 211 aa13.4□□□□□ -0.26
NCBP3-207ENST00000577169 HPXP02790 462 aa13.4□□□□□ -0.26
NCBP3-207ENST00000577169 LYNX1P0DP58 116 aa13.4□□□□□ -0.26
NCBP3-207ENST00000577169 MAGEB1P43366 347 aa13.4□□□□□ -0.26
NCBP3-207ENST00000577169 TPTEP56180 551 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms