RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 NDEL1Q9GZM8 345 aa10.06□□□□□ -0.8
LITAF-219ENST00000576334 METTL17Q9H7H0 456 aaPredicted RBP10.06□□□□□ -0.8
LITAF-219ENST00000576334 TBCCD1Q9NVR7 557 aa10.06□□□□□ -0.8
LITAF-219ENST00000576334 POLR1DQ9Y2S0 133 aa10.06□□□□□ -0.8
LITAF-219ENST00000576334 LYVE1Q9Y5Y7 322 aa10.06□□□□□ -0.8
LITAF-219ENST00000576334 ANK2Q01484 3957 aa10.06□□□□□ -0.8
LITAF-219ENST00000576334 LOC105371242A0A075B767 164 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 ISPDA4D126 451 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 C5orf63A6NC05 138 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 ANKRD65E5RJM6 399 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 H0YL77 283 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 GASTP01350 101 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 IGHV2-5P01817 119 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 SELEP16581 610 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 NOS3P29474 1203 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 SMIM11AP58511 58 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 HIST1H3AP68431 136 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 TNFAIP6P98066 277 aaPredicted RBP10.05□□□□□ -0.8
LITAF-219ENST00000576334 TEKQ02763 1124 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.05□□□□□ -0.8
LITAF-219ENST00000576334 TSPAN31Q12999 210 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 CDK5R2Q13319 367 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 FAM209AQ5JX71 171 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 HIST2H3PS2Q5TEC6 136 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 OR2T2Q6IF00 324 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 SLC18B1Q6NT16 456 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 HIST2H3AQ71DI3 136 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 NPEPL1Q8NDH3 523 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 BHLHE23Q8NDY6 225 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 SLC26A10Q8NG04 563 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 OR10AD1Q8NGE0 317 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 OR51L1Q8NGJ5 315 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 OR51F2Q8NH61 342 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 ITLN1Q8WWA0 313 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 HAVCR1Q96D42 359 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 ELMOD3Q96FG2 381 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 NSL1Q96IY1 281 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 C19orf24Q9BVV8 132 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 KRCC1Q9NPI7 259 aaPredicted RBP10.05□□□□□ -0.8
LITAF-219ENST00000576334 G6PC2Q9NQR9 355 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 MRPL22Q9NWU5 206 aaKnown RBP10.05□□□□□ -0.8
LITAF-219ENST00000576334 UBAP1Q9NZ09 502 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 TMCC3Q9ULS5 477 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 U3KQV3 271 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 WNK2Q9Y3S1 2297 aa10.05□□□□□ -0.8
LITAF-219ENST00000576334 TVP23AA6NH52 213 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 TNFRSF11BO00300 401 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 ARPC3O15145 178 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 ZNF205O95201 554 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 SOX14O95416 240 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 RENP00797 406 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 CD55P08174 381 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 ADRA2CP18825 462 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 GSTM3P21266 225 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 KITLGP21583 273 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 ZFP36P26651 326 aaKnown RBP10.04□□□□□ -0.8
LITAF-219ENST00000576334 CRABP1P29762 137 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 SEC61A1P61619 476 aaKnown RBP10.04□□□□□ -0.8
LITAF-219ENST00000576334 LCN2P80188 198 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 HOXA4Q00056 320 aaPredicted RBP10.04□□□□□ -0.8
LITAF-219ENST00000576334 COX10Q12887 443 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 ZNF362Q5T0B9 420 aaPredicted RBP10.04□□□□□ -0.8
LITAF-219ENST00000576334 ZNF770Q6IQ21 691 aaPredicted RBP10.04□□□□□ -0.8
LITAF-219ENST00000576334 ACSM5Q6NUN0 579 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 ARL9Q6T311 187 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 UNQ6126/PRO20091Q6UXV3 157 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 CCDC197Q8NCU1 140 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 OR10S1Q8NGN2 331 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 OR9Q1Q8NGQ5 310 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 ZNF420Q8TAQ5 688 aaPredicted RBP10.04□□□□□ -0.8
LITAF-219ENST00000576334 MAP6Q96JE9 813 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 DDOQ99489 341 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 GAL3ST1Q99999 423 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 WACQ9BTA9 647 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 PNRC2Q9NPJ4 139 aaKnown RBP10.04□□□□□ -0.8
LITAF-219ENST00000576334 ACTR3BQ9P1U1 418 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 ZDHHC8Q9ULC8 765 aa10.04□□□□□ -0.8
LITAF-219ENST00000576334 F5H5K5 113 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 H3BSA7 217 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 BHLHE40O14503 412 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 MLNRO43193 412 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 HLA-DQA2P01906 255 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 HLA-DPB1P04440 258 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 GYPBP06028 91 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 ADH4P08319 380 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 SBK2P0C263 348 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 CLUP10909 449 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 GGT2P36268 569 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 MAGEA2P43356 314 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 HMGA2P52926 109 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 ZBTB46Q86UZ6 589 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 AQP11Q8NBQ7 271 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 GJC3Q8NFK1 279 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 OR4Q3Q8NH05 313 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 RAB1CQ92928 201 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 PTP4A1Q93096 173 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 CCDC124Q96CT7 223 aaKnown RBP10.03□□□□□ -0.8
LITAF-219ENST00000576334 OR2V2Q96R30 315 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 SIGLEC11Q96RL6 698 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 PITX2Q99697 317 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms