RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 TGFBR2P37173 567 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 PSMB10P40306 273 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 TAS2R41P59536 307 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 VSNL1P62760 191 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 TOP3AQ13472 1001 aaPredicted RBP7.47□□□□□ -1.21
SMG6-218ENST00000575454 ENDOGQ14249 297 aaKnown RBP7.47□□□□□ -1.21
SMG6-218ENST00000575454 LAPTM4AQ15012 233 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 ANKDD1AQ495B1 522 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 RUNDC3AQ59EK9 446 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 PAGE3Q5JUK9 113 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 RUSC1-AS1Q66K80 236 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 DHRS7BQ6IAN0 325 aaPredicted RBP7.47□□□□□ -1.21
SMG6-218ENST00000575454 C11orf88Q6PI97 169 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 EPGNQ6UW88 154 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 ZNF841Q6ZN19 808 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 Q6ZSV7 163 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 Q6ZTK2 550 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 OR5AS1Q8N127 324 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 MREGQ8N565 214 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 CLDN22Q8N7P3 220 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 ANKRD42Q8N9B4 389 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 SCCPDHQ8NBX0 429 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 OR10AD1Q8NGE0 317 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 MOSPD2Q8NHP6 518 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 PFN4Q8NHR9 129 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 NPRL2Q8WTW4 380 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 ZNF583Q96ND8 569 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 WDFY2Q96P53 400 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 TECTBQ96PL2 329 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 PRSS27Q9BQR3 290 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 POFUT1Q9H488 388 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 IKZF5Q9H5V7 419 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 TMEM100Q9NV29 134 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 CCDC167Q9P0B6 97 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 ATPIF1Q9UII2 106 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 HIF3AQ9Y2N7 669 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 MED31Q9Y3C7 131 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 USH1CQ9Y6N9 552 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 EPPK1P58107 5090 aaKnown RBP7.47□□□□□ -1.21
SMG6-218ENST00000575454 BIRC6Q9NR09 4857 aa7.47□□□□□ -1.21
SMG6-218ENST00000575454 ZNF816-ZNF321PA0A0X1KG74 233 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 OR6C6A6NF89 314 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 C22orf46C9J442 243 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 G3V4G9 280 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 POLR3GO15318 223 aaPredicted RBP7.46□□□□□ -1.22
SMG6-218ENST00000575454 SFTPBP07988 381 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 MMP9P14780 707 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 FUT4P22083 530 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 IFNA8P32881 189 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 RBMXP38159 391 aaKnown RBP7.46□□□□□ -1.22
SMG6-218ENST00000575454 LOXL3P58215 753 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 AQP6Q13520 282 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 FAM189A2Q15884 450 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 TNFAIP8L3Q5GJ75 292 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 SAMD5Q5TGI4 173 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 OR2T2Q6IF00 324 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 C1orf94Q6P1W5 598 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 MAVSQ7Z434 540 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 IGFN1Q86VF2 1251 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 FUNDC1Q8IVP5 155 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 DTX3Q8N9I9 347 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 SPERTQ8NA61 448 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 OR4D11Q8NGI4 311 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 OR1F12Q8NHA8 337 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 TMEM255BQ8WV15 326 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 LHX4Q969G2 390 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 APOBEC3DQ96AK3 386 aaPredicted RBP7.46□□□□□ -1.22
SMG6-218ENST00000575454 TBX15Q96SF7 602 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 CPPED1Q9BRF8 314 aaPredicted RBP7.46□□□□□ -1.22
SMG6-218ENST00000575454 HCAR1Q9BXC0 346 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 MMADHCQ9H3L0 296 aaPredicted RBP7.46□□□□□ -1.22
SMG6-218ENST00000575454 RABEP2Q9H5N1 569 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 C20orf141Q9NUB4 165 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 RIMS3Q9UJD0 308 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 BAG5Q9UL15 447 aa7.46□□□□□ -1.22
SMG6-218ENST00000575454 NOP16Q9Y3C1 178 aaKnown RBP7.46□□□□□ -1.22
SMG6-218ENST00000575454 A0A0U1RQK1 487 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 A0A1B0GWJ7 208 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 IQCF6A8MYZ5 107 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 F5H5P2 479 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 XKRYO14609 159 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 GPR37O15354 613 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 IFNA14P01570 189 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 FBP1P09467 338 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 FPR3P25089 353 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 ERFP50548 548 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 SLC18A1P54219 525 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 WDR4P57081 412 aaKnown RBP7.45□□□□□ -1.22
SMG6-218ENST00000575454 CTXN1P60606 82 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 LSM6P62312 80 aaKnown RBP7.45□□□□□ -1.22
SMG6-218ENST00000575454 HERPUD1Q15011 391 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 WDR93Q6P2C0 686 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 LYPD2Q6UXB3 125 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 DLEU7Q6UYE1 221 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 TSPYL5Q86VY4 417 aaPredicted RBP7.45□□□□□ -1.22
SMG6-218ENST00000575454 NKAIN4Q8IVV8 208 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 PLPP7Q8NBV4 271 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 OR5R1Q8NH85 324 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 MRAPQ8TCY5 172 aa7.45□□□□□ -1.22
SMG6-218ENST00000575454 LRRC8CQ8TDW0 803 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms