RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 RGCCQ9H4X1 137 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 TREM2Q9NZC2 230 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 CKLFQ9UBR5 152 aa12.94□□□□□ -0.34
SMG6-215ENST00000574501 A0A087WV62 115 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 A0A1W2PPE2 198 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 RHPN2P1A8MT19 583 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 IFNA6P05013 189 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 PI3P19957 117 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 RAB6AP20340 208 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 MFGE8Q08431 387 aaPredicted RBP12.93□□□□□ -0.34
SMG6-215ENST00000574501 SRSF5Q13243 272 aaKnown RBP12.93□□□□□ -0.34
SMG6-215ENST00000574501 DHCR24Q15392 516 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 ISXQ2M1V0 245 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 ZNF550Q7Z398 422 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 MDGA2Q7Z553 956 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 AKR7LQ8NHP1 331 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 ASB17Q8WXJ9 295 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 SLC39A7Q92504 469 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 SGK3Q96BR1 496 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 NRSN2Q9GZP1 204 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 RAB33BQ9H082 229 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 SLC2A4RGQ9NR83 387 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 KPTNQ9Y664 436 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 COLEC10Q9Y6Z7 277 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 NKX2-2O95096 273 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 S100A10P60903 97 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 CYCSP99999 105 aaKnown RBP12.93□□□□□ -0.34
SMG6-215ENST00000574501 RAB32Q13637 225 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 ZNF77Q15935 545 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 HNRNPA1L2Q32P51 320 aaKnown RBP12.93□□□□□ -0.34
SMG6-215ENST00000574501 PRSS54Q6PEW0 395 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 OR4D6Q8NGJ1 314 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 TSPAN32Q96QS1 320 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 TAAR9Q96RI9 348 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 GPX7Q96SL4 187 aaPredicted RBP12.93□□□□□ -0.34
SMG6-215ENST00000574501 ZNF587Q96SQ5 575 aaPredicted RBP12.93□□□□□ -0.34
SMG6-215ENST00000574501 IER2Q9BTL4 223 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.93□□□□□ -0.34
SMG6-215ENST00000574501 GSKIPQ9P0R6 139 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 B9D1Q9UPM9 204 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 AMDHD2Q9Y303 409 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 THSD7BQ9C0I4 1608 aa12.93□□□□□ -0.34
SMG6-215ENST00000574501 TRBV23OR9-2A0A075B6M9 112 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 CTSVO60911 334 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 MOSPD3O75425 235 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 SLC34A2O95436 690 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 CSTAP01040 98 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 GNB3P16520 340 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 CEBPBP17676 345 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 P2RY4P51582 365 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 RPS15AP62244 130 aaKnown RBP12.92□□□□□ -0.34
SMG6-215ENST00000574501 ELAVL3Q14576 367 aaKnown RBP12.92□□□□□ -0.34
SMG6-215ENST00000574501 SLC17A1Q14916 467 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 ZNF260Q3ZCT1 412 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 AWAT2Q6E213 333 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 DMRTC2Q8IXT2 367 aaPredicted RBP12.92□□□□□ -0.34
SMG6-215ENST00000574501 KREMEN2Q8NCW0 462 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 OR10H5Q8NGA6 315 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 AQP3Q92482 292 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 SLAMF9Q96A28 289 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 RAB3CQ96E17 227 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 MARS2Q96GW9 593 aaKnown RBP12.92□□□□□ -0.34
SMG6-215ENST00000574501 OR10C1Q96KK4 312 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 SPACA1Q9HBV2 294 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 PDE7BQ9NP56 450 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 LRIT1Q9P2V4 623 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 HRKO00198 91 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 LMX1BO60663 402 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 GPR75O95800 540 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 ADPRHP54922 357 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 FAHD2BQ6P2I3 314 aaPredicted RBP12.92□□□□□ -0.34
SMG6-215ENST00000574501 ZNF615Q8N8J6 731 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 LRRC75AQ8NAA5 344 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 OR4C3Q8NH37 302 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 OTOSQ8NHW6 89 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 FAHD2AQ96GK7 314 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 AQP10Q96PS8 301 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 CFHR5Q9BXR6 569 aa12.92□□□□□ -0.34
SMG6-215ENST00000574501 ZNF107Q9UII5 783 aaPredicted RBP12.92□□□□□ -0.34
SMG6-215ENST00000574501 RANBP2P49792 3224 aaKnown RBP12.91□□□□□ -0.34
SMG6-215ENST00000574501 FANCMQ8IYD8 2048 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 IFITM10A6NMD0 228 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 LDLRAD4O15165 306 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 PRKNO60260 465 aaPredicted RBP12.91□□□□□ -0.34
SMG6-215ENST00000574501 IFNA2P01563 188 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 CSTBP04080 98 aaKnown RBP12.91□□□□□ -0.34
SMG6-215ENST00000574501 SULT1A2P50226 295 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 NPY4RP50391 375 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 RAB5CP51148 216 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 ENPP2Q13822 863 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 ZNF74Q16587 644 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 GKN2Q86XP6 184 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 SLC25A43Q8WUT9 341 aaPredicted RBP12.91□□□□□ -0.34
SMG6-215ENST00000574501 LCN9Q8WX39 176 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 C14orf144Q96I85 54 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 OR5B2Q96R09 309 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 LPAR4Q99677 370 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 METTL8Q9H825 291 aaKnown RBP12.91□□□□□ -0.34
SMG6-215ENST00000574501 UFSP2Q9NUQ7 469 aa12.91□□□□□ -0.34
SMG6-215ENST00000574501 GDF2Q9UK05 429 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms