RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 C22orf46C9J442 243 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 POLR3GO15318 223 aaPredicted RBP9.9□□□□□ -0.82
CTNS-208ENST00000574218 OPN1MWP04001 364 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 OPN1MW2P0DN77 364 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 OPN1MW3P0DN78 364 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 GPX2P18283 190 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 IER3P46695 156 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 RAP1BP61224 184 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 RAP1AP62834 184 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 EGR3Q06889 387 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 ENDOGQ14249 297 aaKnown RBP9.9□□□□□ -0.82
CTNS-208ENST00000574218 FAM201AQ5SY85 155 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 KPRPQ5T749 579 aaPredicted RBP9.9□□□□□ -0.82
CTNS-208ENST00000574218 INTS11Q5TA45 600 aaKnown RBP9.9□□□□□ -0.82
CTNS-208ENST00000574218 SAMD5Q5TGI4 173 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 LYPD2Q6UXB3 125 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 FOXL2NBQ6ZUU3 175 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 GPR32P1Q8NGA4 272 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 TMEM239Q8WW34 195 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 RASD2Q96D21 266 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 TBX15Q96SF7 602 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 RASSF4Q9H2L5 321 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 EMC7Q9NPA0 242 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 POLE4Q9NR33 117 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 TMEM100Q9NV29 134 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 CCDC167Q9P0B6 97 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 SLAMF8Q9P0V8 285 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 MED31Q9Y3C7 131 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 USH1CQ9Y6N9 552 aa9.9□□□□□ -0.82
CTNS-208ENST00000574218 ZNF816-ZNF321PA0A0X1KG74 233 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 F5H5P2 479 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 J3QW42 95 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 SNNO75324 88 aaPredicted RBP9.89□□□□□ -0.83
CTNS-208ENST00000574218 IGF2P01344 180 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 FBP1P09467 338 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 FUT4P22083 530 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 TGFBR2P37173 567 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 ERFP50548 548 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 CTXN1P60606 82 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 HERPUD1Q15011 391 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 LAPTM4AQ15012 233 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 PAGE3Q5JUK9 113 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 BLOC1S3Q6QNY0 202 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 SPERTQ8NA61 448 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 PCYOX1LQ8NBM8 494 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 BHLHE23Q8NDY6 225 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 OR4D11Q8NGI4 311 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 TMEM255BQ8WV15 326 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 C10orf82Q8WW14 230 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 SGCDQ92629 289 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 ERGIC1Q969X5 290 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 ZNF583Q96ND8 569 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 PRSS27Q9BQR3 290 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 HCAR1Q9BXC0 346 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 PCDHAC1Q9H158 963 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 IKZF5Q9H5V7 419 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 TRIM36Q9NQ86 728 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 VPREB3Q9UKI3 123 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 TMCC3Q9ULS5 477 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 GMEB1Q9Y692 573 aa9.89□□□□□ -0.83
CTNS-208ENST00000574218 KMT2CQ8NEZ4 4911 aaKnown RBP9.88□□□□□ -0.83
CTNS-208ENST00000574218 ADAM20O43506 726 aa9.88□□□□□ -0.83
CTNS-208ENST00000574218 MMP9P14780 707 aa9.88□□□□□ -0.83
CTNS-208ENST00000574218 FPR3P25089 353 aa9.88□□□□□ -0.83
CTNS-208ENST00000574218 IFNA8P32881 189 aa9.88□□□□□ -0.83
CTNS-208ENST00000574218 RAD23AP54725 363 aa9.88□□□□□ -0.83
CTNS-208ENST00000574218 VSNL1P62760 191 aa9.88□□□□□ -0.83
CTNS-208ENST00000574218 AQP6Q13520 282 aa9.88□□□□□ -0.83
CTNS-208ENST00000574218 MPP2Q14168 576 aa9.88□□□□□ -0.83
CTNS-208ENST00000574218 VAX1Q5SQQ9 334 aa9.88□□□□□ -0.83
CTNS-208ENST00000574218 FBXW12Q6X9E4 464 aa9.88□□□□□ -0.83
CTNS-208ENST00000574218 ZNF841Q6ZN19 808 aa9.88□□□□□ -0.83
CTNS-208ENST00000574218 NKAIN4Q8IVV8 208 aa9.88□□□□□ -0.83
CTNS-208ENST00000574218 PDZD9Q8IXQ8 264 aa9.88□□□□□ -0.83
CTNS-208ENST00000574218 BOLLQ8N9W6 283 aaKnown RBP9.88□□□□□ -0.83
CTNS-208ENST00000574218 C19orf18Q8NEA5 215 aa9.88□□□□□ -0.83
CTNS-208ENST00000574218 APOBEC3DQ96AK3 386 aaPredicted RBP9.88□□□□□ -0.83
CTNS-208ENST00000574218 CPPED1Q9BRF8 314 aaPredicted RBP9.88□□□□□ -0.83
CTNS-208ENST00000574218 POLR2J2Q9GZM3 115 aaKnown RBP9.88□□□□□ -0.83
CTNS-208ENST00000574218 POLR2J3Q9H1A7 115 aaKnown RBP9.88□□□□□ -0.83
CTNS-208ENST00000574218 C20orf141Q9NUB4 165 aa9.88□□□□□ -0.83
CTNS-208ENST00000574218 NECAP2Q9NVZ3 263 aa9.88□□□□□ -0.83
CTNS-208ENST00000574218 HIF3AQ9Y2N7 669 aa9.88□□□□□ -0.83
CTNS-208ENST00000574218 POLR1DQ9Y2S0 133 aa9.88□□□□□ -0.83
CTNS-208ENST00000574218 NOTCH3Q9UM47 2321 aa9.87□□□□□ -0.83
CTNS-208ENST00000574218 TRBV5-3A0A0A0MS03 114 aa9.87□□□□□ -0.83
CTNS-208ENST00000574218 IQCF6A8MYZ5 107 aa9.87□□□□□ -0.83
CTNS-208ENST00000574218 XKRYO14609 159 aa9.87□□□□□ -0.83
CTNS-208ENST00000574218 MLNRO43193 412 aa9.87□□□□□ -0.83
CTNS-208ENST00000574218 NDUFA2O43678 99 aa9.87□□□□□ -0.83
CTNS-208ENST00000574218 XPNPEP2O43895 674 aa9.87□□□□□ -0.83
CTNS-208ENST00000574218 TSPAN9O75954 239 aa9.87□□□□□ -0.83
CTNS-208ENST00000574218 OR5F1O95221 314 aa9.87□□□□□ -0.83
CTNS-208ENST00000574218 PAHP00439 452 aa9.87□□□□□ -0.83
CTNS-208ENST00000574218 EEF1B2P24534 225 aaKnown RBP9.87□□□□□ -0.83
CTNS-208ENST00000574218 GABRA5P31644 462 aa9.87□□□□□ -0.83
CTNS-208ENST00000574218 PSMB10P40306 273 aa9.87□□□□□ -0.83
CTNS-208ENST00000574218 ARF6P62330 175 aa9.87□□□□□ -0.83
CTNS-208ENST00000574218 OR8B8Q15620 311 aa9.87□□□□□ -0.83
CTNS-208ENST00000574218 AGKQ53H12 422 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms