RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 MARCH7Q9H992 704 aa11□□□□□ -0.65
TRAPPC1-206ENST00000573989 BARX1Q9HBU1 254 aaPredicted RBP11□□□□□ -0.65
TRAPPC1-206ENST00000573989 ZNF701Q9NV72 531 aaPredicted RBP11□□□□□ -0.65
TRAPPC1-206ENST00000573989 TBCCD1Q9NVR7 557 aa11□□□□□ -0.65
TRAPPC1-206ENST00000573989 SLCO1C1Q9NYB5 712 aa11□□□□□ -0.65
TRAPPC1-206ENST00000573989 SNTNA6NMZ2 147 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 ZNF878C9JN71 531 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 H7C417 338 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 MT-ND5P03915 603 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 SLC2A5P22732 501 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 POLR2IP36954 125 aaKnown RBP10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 CDKN1AP38936 164 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 WNT5AP41221 380 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 PPOXP50336 477 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 TPTEP56180 551 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 KLF3P57682 345 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 PPP1CBP62140 327 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 EIF2B1Q14232 305 aaKnown RBP10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 ZIK1Q3SY52 487 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 C11orf71Q6IPW1 123 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 LYPD4Q6UWN0 246 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 CFAP77Q6ZQR2 320 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 RHOUQ7L0Q8 258 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 MEPCEQ7L2J0 689 aaKnown RBP10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 TIGD4Q8IY51 512 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 ZNF101Q8IZC7 436 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 PACRGLQ8N7B6 248 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 ZNF555Q8NEP9 628 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 BBS1Q8NFJ9 593 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 FAM81AQ8TBF8 368 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 SNX33Q8WV41 574 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 RFKQ969G6 155 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 APOBEC3DQ96AK3 386 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 SLAMF6Q96DU3 332 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 SLC29A1Q99808 456 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 COPS4Q9BT78 406 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 RAB1BQ9H0U4 201 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 CXXC4Q9H2H0 198 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 MS4A5Q9H3V2 200 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 TOR3AQ9H497 397 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 DYNLRB1Q9NP97 96 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 SMPD3Q9NY59 655 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 DUSP13Q9UII6 198 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 GMPPBQ9Y5P6 360 aa10.99□□□□□ -0.65
TRAPPC1-206ENST00000573989 A0A1W2PPW3 197 aa10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 F5H5K5 113 aa10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 M0R233 179 aa10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 MPZL2O60487 215 aa10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 APOC1P02654 83 aa10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 LYNP07948 512 aa10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 ZNF250P15622 560 aa10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 RPS27P42677 84 aaKnown RBP10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 GRB2P62993 217 aaKnown RBP10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 EFNB1P98172 346 aa10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 TMED1Q13445 227 aa10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 NKPD1Q17RQ9 610 aa10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 LRRC36Q1X8D7 754 aa10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 MST1LQ2TV78 715 aa10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 PRSS57Q6UWY2 283 aa10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 ZNF771Q7L3S4 317 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 SLC16A9Q7RTY1 509 aa10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 OTOSQ8NHW6 89 aa10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 THEM6Q8WUY1 208 aa10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 MAP6Q96JE9 813 aa10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 VRK1Q99986 396 aaPredicted RBP10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 SYT3Q9BQG1 590 aa10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 MRPL37Q9BZE1 423 aaKnown RBP10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 YIPF3Q9GZM5 350 aa10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 SP140LQ9H930 580 aa10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 CENPMQ9NSP4 180 aa10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 DDX28Q9NUL7 540 aaKnown RBP10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 WARS2Q9UGM6 360 aaKnown RBP10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 LAMP5Q9UJQ1 280 aa10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 TMEM14AQ9Y6G1 99 aa10.98□□□□□ -0.65
TRAPPC1-206ENST00000573989 PRRC2AP48634 2157 aaKnown RBP10.97□□□□□ -0.65
TRAPPC1-206ENST00000573989 LOC100130705A0A1B0GUX0 176 aa10.97□□□□□ -0.65
TRAPPC1-206ENST00000573989 M0R135 149 aa10.97□□□□□ -0.65
TRAPPC1-206ENST00000573989 SELENOFO60613 162 aa10.97□□□□□ -0.65
TRAPPC1-206ENST00000573989 HSD11B1P28845 292 aa10.97□□□□□ -0.65
TRAPPC1-206ENST00000573989 LIPAP38571 399 aa10.97□□□□□ -0.65
TRAPPC1-206ENST00000573989 NAA10P41227 235 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC1-206ENST00000573989 SLC6A9P48067 706 aa10.97□□□□□ -0.65
TRAPPC1-206ENST00000573989 POU4F2Q12837 409 aa10.97□□□□□ -0.65
TRAPPC1-206ENST00000573989 Q5PR19 223 aa10.97□□□□□ -0.65
TRAPPC1-206ENST00000573989 AADACL4Q5VUY2 407 aa10.97□□□□□ -0.65
TRAPPC1-206ENST00000573989 MEDAGQ5VYS4 303 aa10.97□□□□□ -0.65
TRAPPC1-206ENST00000573989 MBNL2Q5VZF2 373 aaKnown RBP10.97□□□□□ -0.65
TRAPPC1-206ENST00000573989 KCTD18Q6PI47 426 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC1-206ENST00000573989 RFPL4BQ6ZWI9 263 aa10.97□□□□□ -0.65
TRAPPC1-206ENST00000573989 GALNT4Q8N4A0 578 aa10.97□□□□□ -0.65
TRAPPC1-206ENST00000573989 SLC25A40Q8TBP6 338 aa10.97□□□□□ -0.65
TRAPPC1-206ENST00000573989 KLF14Q8TD94 323 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC1-206ENST00000573989 ST7LQ8TDW4 575 aa10.97□□□□□ -0.65
TRAPPC1-206ENST00000573989 SLC7A6Q92536 515 aa10.97□□□□□ -0.65
TRAPPC1-206ENST00000573989 ZNF799Q96GE5 643 aa10.97□□□□□ -0.65
TRAPPC1-206ENST00000573989 MARS2Q96GW9 593 aaKnown RBP10.97□□□□□ -0.65
TRAPPC1-206ENST00000573989 CNN2Q99439 309 aaKnown RBP10.97□□□□□ -0.65
TRAPPC1-206ENST00000573989 MNTQ99583 582 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms