RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 FBXL2Q9UKC9 423 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 NUP50Q9UKX7 468 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 SPEF1Q9Y4P9 236 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 FREM2Q5SZK8 3169 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 hCG_1807616A0A1W2PRN6 198 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 MEGF11A6BM72 1044 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 WIPF3A6NGB9 483 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 B8ZZF3 427 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 SPDEFO95238 335 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 TTRP02766 147 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 UBCP0CG48 685 aaKnown RBP10□□□□□ -0.81
RPAIN-212ENST00000573126 PPP3CBP16298 524 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 SSBP1Q04837 148 aaKnown RBP10□□□□□ -0.81
RPAIN-212ENST00000573126 TOMM20Q15388 145 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 PCK2Q16822 640 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 LY6G6FQ5SQ64 297 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 TMEM244Q5VVB8 128 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 OR52W1Q6IF63 320 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 GSG1LQ6UXU4 331 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 ZNF574Q6ZN55 896 aaPredicted RBP10□□□□□ -0.81
RPAIN-212ENST00000573126 GPAT4Q86UL3 456 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 RTN4RL2Q86UN3 420 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 ZNF584Q8IVC4 421 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 C12orf45Q8N5I9 185 aaPredicted RBP10□□□□□ -0.81
RPAIN-212ENST00000573126 CHST4Q8NCG5 386 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 NFAM1Q8NET5 270 aaPredicted RBP10□□□□□ -0.81
RPAIN-212ENST00000573126 RNF133Q8WVZ7 376 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 SLAMF6Q96DU3 332 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 OR6C1Q96RD1 312 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 MFFQ9GZY8 342 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 ZNF768Q9H5H4 540 aaKnown RBP10□□□□□ -0.81
RPAIN-212ENST00000573126 SDHAF2Q9NX18 166 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 SEMA5BQ9P283 1151 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 UPB1Q9UBR1 384 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 GDF2Q9UK05 429 aaPredicted RBP10□□□□□ -0.81
RPAIN-212ENST00000573126 RTTNQ86VV8 2226 aa10□□□□□ -0.81
RPAIN-212ENST00000573126 OR6C65A6NJZ3 312 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 LIPT2A6NK58 231 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 CCDC85CA6NKD9 419 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 TMEM200CA6NKL6 621 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 SULT1C2O00338 296 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 AQP8O94778 261 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 PMS2P2O95744 297 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 ZNF735P0CB33 412 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 SLC2A1P11166 492 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 MMP16P51512 607 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 GMFBP60983 142 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 ZP4Q12836 540 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 MYBPHQ13203 477 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 DHRS2Q13268 280 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 LRRC37A5PQ49AS3 106 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 NKAIN1Q4KMZ8 207 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 WDR74Q6RFH5 385 aaPredicted RBP9.99□□□□□ -0.81
RPAIN-212ENST00000573126 ZNF813Q6ZN06 617 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 OR10H5Q8NGA6 315 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 OR10S1Q8NGN2 331 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 OR13C8Q8NGS7 320 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 OR13C9Q8NGT0 318 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 CCDC107Q8WV48 283 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 NUDCD2Q8WVJ2 157 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 SEC61A2Q9H9S3 476 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 SCPEP1Q9HB40 452 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 FAM206AQ9NX38 181 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 SRPK3Q9UPE1 567 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 COL5A1P20908 1838 aaPredicted RBP9.99□□□□□ -0.81
RPAIN-212ENST00000573126 A0A1W2PNR3 127 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 LOC390937A0A1W2PQ73 354 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 CPED1A4D0V7 1026 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 H3BUI4 141 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 RAB27BO00194 218 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 CCSO14618 274 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 SYT7O43581 403 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 HLA-AP01891 365 aaKnown RBP9.99□□□□□ -0.81
RPAIN-212ENST00000573126 FOSL2P15408 326 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 BDKRB2P30411 391 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 CDAP32320 146 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 UNC119Q13432 240 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 CDNFQ49AH0 187 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 WDR45BQ5MNZ6 344 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 C1orf100Q5SVJ3 147 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 CARD17Q5XLA6 110 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 CFAP77Q6ZQR2 320 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 LYPD6Q86Y78 171 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 PAQR4Q8N4S7 273 aaPredicted RBP9.99□□□□□ -0.81
RPAIN-212ENST00000573126 NKAIN3Q8N8D7 197 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 STEAP2Q8NFT2 490 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 OR10G3Q8NGC4 313 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 SLC25A21Q9BQT8 299 aaPredicted RBP9.99□□□□□ -0.81
RPAIN-212ENST00000573126 PBOV1Q9GZY1 135 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 ALX4Q9H161 411 aaPredicted RBP9.99□□□□□ -0.81
RPAIN-212ENST00000573126 TTYH1Q9H313 450 aaPredicted RBP9.99□□□□□ -0.81
RPAIN-212ENST00000573126 C1orf198Q9H425 327 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 PPP4R1LQ9P1A2 415 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 B3GAT1Q9P2W7 334 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 POLR1DQ9Y2S0 133 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 RHBDD3Q9Y3P4 386 aa9.99□□□□□ -0.81
RPAIN-212ENST00000573126 TEX51A0A1B0GUA7 166 aa9.98□□□□□ -0.81
RPAIN-212ENST00000573126 CD37P11049 281 aa9.98□□□□□ -0.81
RPAIN-212ENST00000573126 ZNF41P51814 821 aaPredicted RBP9.98□□□□□ -0.81
RPAIN-212ENST00000573126 MFAP5Q13361 173 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms