RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 GGTLC2Q14390 218 aa17.66■□□□□ 0.42
CHMP6-204ENST00000572778 AMIGO2Q86SJ2 522 aa17.66■□□□□ 0.42
CHMP6-204ENST00000572778 HIPK1Q86Z02 1210 aa17.66■□□□□ 0.42
CHMP6-204ENST00000572778 ZNF786Q8N393 782 aa17.66■□□□□ 0.42
CHMP6-204ENST00000572778 ZNF511Q8NB15 262 aa17.66■□□□□ 0.42
CHMP6-204ENST00000572778 ZNF540Q8NDQ6 660 aa17.66■□□□□ 0.42
CHMP6-204ENST00000572778 DNAJC9Q8WXX5 260 aa17.66■□□□□ 0.42
CHMP6-204ENST00000572778 LRTOMTQ8WZ04 291 aa17.66■□□□□ 0.42
CHMP6-204ENST00000572778 WDR76Q9H967 626 aa17.66■□□□□ 0.42
CHMP6-204ENST00000572778 PAPOLBQ9NRJ5 636 aaKnown RBP17.66■□□□□ 0.42
CHMP6-204ENST00000572778 COMMD3-BMI1R4GMX3 469 aa17.66■□□□□ 0.42
CHMP6-204ENST00000572778 MTORP42345 2549 aa17.66■□□□□ 0.42
CHMP6-204ENST00000572778 PLSCR5A0PG75 271 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 VWC2LB2RUY7 222 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 F5H5K5 113 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 G3V2T6 193 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 TIMM8AO60220 97 aaPredicted RBP17.65■□□□□ 0.42
CHMP6-204ENST00000572778 HMGN1P05114 100 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 SPARCP09486 303 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 FCGR1AP12314 374 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 PAICSP22234 425 aaKnown RBP17.65■□□□□ 0.42
CHMP6-204ENST00000572778 TUBG1P23258 451 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 RGS6P49758 472 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 DAPP51397 102 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 ZNF81P51508 661 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 RIPPLY3P57055 190 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 CCL8P80075 99 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 CDK5Q00535 292 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 ECH1Q13011 328 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 TSTQ16762 297 aaKnown RBP17.65■□□□□ 0.42
CHMP6-204ENST00000572778 PCGF3Q3KNV8 242 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 TMEM255AQ5JRV8 349 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 TMEM236Q5W0B7 351 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 FAHD1Q6P587 224 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 MAP6Q96JE9 813 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 COG8Q96MW5 612 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 ATF6BQ99941 703 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 HCAR1Q9BXC0 346 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 TEX12Q9BXU0 123 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 BPESC1Q9GZL8 116 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 OR51V1Q9H2C8 321 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 TUBG2Q9NRH3 451 aa17.65■□□□□ 0.42
CHMP6-204ENST00000572778 ZNF593O00488 134 aaPredicted RBP17.64■□□□□ 0.41
CHMP6-204ENST00000572778 TPD52L2O43399 206 aaKnown RBP17.64■□□□□ 0.41
CHMP6-204ENST00000572778 SPRY3O43610 288 aa17.64■□□□□ 0.41
CHMP6-204ENST00000572778 NCR1O76036 304 aa17.64■□□□□ 0.41
CHMP6-204ENST00000572778 ZNF23P17027 643 aa17.64■□□□□ 0.41
CHMP6-204ENST00000572778 COL8A2P25067 703 aa17.64■□□□□ 0.41
CHMP6-204ENST00000572778 ENTPD1P49961 510 aa17.64■□□□□ 0.41
CHMP6-204ENST00000572778 BLVRAP53004 296 aa17.64■□□□□ 0.41
CHMP6-204ENST00000572778 KRTAP1-1Q07627 177 aa17.64■□□□□ 0.41
CHMP6-204ENST00000572778 PSG7Q13046 419 aa17.64■□□□□ 0.41
CHMP6-204ENST00000572778 RSPO1Q2MKA7 263 aaPredicted RBP17.64■□□□□ 0.41
CHMP6-204ENST00000572778 ZDHHC13Q8IUH4 622 aa17.64■□□□□ 0.41
CHMP6-204ENST00000572778 OR5L1Q8NGL2 311 aa17.64■□□□□ 0.41
CHMP6-204ENST00000572778 RDH5Q92781 318 aa17.64■□□□□ 0.41
CHMP6-204ENST00000572778 CMBLQ96DG6 245 aa17.64■□□□□ 0.41
CHMP6-204ENST00000572778 PLEKHA8Q96JA3 519 aa17.64■□□□□ 0.41
CHMP6-204ENST00000572778 PNRC2Q9NPJ4 139 aaKnown RBP17.64■□□□□ 0.41
CHMP6-204ENST00000572778 PTTG3PQ9NZH4 202 aa17.64■□□□□ 0.41
CHMP6-204ENST00000572778 PRR23D1E9PI22 279 aaPredicted RBP17.63■□□□□ 0.41
CHMP6-204ENST00000572778 SURF4O15260 269 aa17.63■□□□□ 0.41
CHMP6-204ENST00000572778 PRR23D2P0DMB1 279 aaPredicted RBP17.63■□□□□ 0.41
CHMP6-204ENST00000572778 PSKH1P11801 424 aa17.63■□□□□ 0.41
CHMP6-204ENST00000572778 GIFP27352 417 aa17.63■□□□□ 0.41
CHMP6-204ENST00000572778 MMP15P51511 669 aa17.63■□□□□ 0.41
CHMP6-204ENST00000572778 CRISP1P54107 249 aa17.63■□□□□ 0.41
CHMP6-204ENST00000572778 TMEM249Q2WGJ8 235 aa17.63■□□□□ 0.41
CHMP6-204ENST00000572778 PLBD1Q6P4A8 553 aa17.63■□□□□ 0.41
CHMP6-204ENST00000572778 DCXRQ7Z4W1 244 aa17.63■□□□□ 0.41
CHMP6-204ENST00000572778 PTP4A1Q93096 173 aa17.63■□□□□ 0.41
CHMP6-204ENST00000572778 APOBEC3DQ96AK3 386 aaPredicted RBP17.63■□□□□ 0.41
CHMP6-204ENST00000572778 CYSLTR2Q9NS75 346 aa17.63■□□□□ 0.41
CHMP6-204ENST00000572778 KRT84Q9NSB2 600 aa17.63■□□□□ 0.41
CHMP6-204ENST00000572778 DECR2Q9NUI1 292 aa17.63■□□□□ 0.41
CHMP6-204ENST00000572778 NKIRAS2Q9NYR9 191 aa17.63■□□□□ 0.41
CHMP6-204ENST00000572778 PURGQ9UJV8 347 aaKnown RBP17.63■□□□□ 0.41
CHMP6-204ENST00000572778 IGHV4-61A0A0C4DH41 118 aa17.62■□□□□ 0.41
CHMP6-204ENST00000572778 ZSCAN5BA6NJL1 495 aa17.62■□□□□ 0.41
CHMP6-204ENST00000572778 J3QW42 95 aa17.62■□□□□ 0.41
CHMP6-204ENST00000572778 CDC14BO60729 498 aa17.62■□□□□ 0.41
CHMP6-204ENST00000572778 GLCEO94923 617 aa17.62■□□□□ 0.41
CHMP6-204ENST00000572778 GSTT1P30711 240 aa17.62■□□□□ 0.41
CHMP6-204ENST00000572778 LIPAP38571 399 aa17.62■□□□□ 0.41
CHMP6-204ENST00000572778 KPNB1Q14974 876 aaKnown RBP17.62■□□□□ 0.41
CHMP6-204ENST00000572778 KLHL12Q53G59 568 aa17.62■□□□□ 0.41
CHMP6-204ENST00000572778 LINC01590Q5TEZ4 76 aa17.62■□□□□ 0.41
CHMP6-204ENST00000572778 ERI1Q8IV48 349 aaKnown RBP17.62■□□□□ 0.41
CHMP6-204ENST00000572778 PYDC1Q8WXC3 89 aa17.62■□□□□ 0.41
CHMP6-204ENST00000572778 YIPF5Q969M3 257 aa17.62■□□□□ 0.41
CHMP6-204ENST00000572778 SEMA6AQ9H2E6 1030 aa17.62■□□□□ 0.41
CHMP6-204ENST00000572778 SLC25A19Q9HC21 320 aa17.62■□□□□ 0.41
CHMP6-204ENST00000572778 MSL2Q9HCI7 577 aa17.62■□□□□ 0.41
CHMP6-204ENST00000572778 CENPMQ9NSP4 180 aa17.62■□□□□ 0.41
CHMP6-204ENST00000572778 TVP23BQ9NYZ1 205 aa17.62■□□□□ 0.41
CHMP6-204ENST00000572778 CGGBP1Q9UFW8 167 aaPredicted RBP17.62■□□□□ 0.41
CHMP6-204ENST00000572778 MITFO75030 526 aaPredicted RBP17.61■□□□□ 0.41
CHMP6-204ENST00000572778 IGHV1-46P01743 117 aa17.61■□□□□ 0.41
CHMP6-204ENST00000572778 LCATP04180 440 aa17.61■□□□□ 0.41
CHMP6-204ENST00000572778 ACSM4P0C7M7 580 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms