RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 UQCRC1P31930 480 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 POLR2JP52435 117 aaKnown RBP3.17□□□□□ -1.9
SMG6-208ENST00000570874 ATP1B3P54709 279 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 AQP4P55087 323 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 CDC42P60953 191 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 RAP1BP61224 184 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 NUTF2P61970 127 aaKnown RBP3.17□□□□□ -1.9
SMG6-208ENST00000570874 RPS13P62277 151 aaKnown RBP3.17□□□□□ -1.9
SMG6-208ENST00000570874 ERVK-8P63133 956 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 SNRPNP63162 240 aaKnown RBP3.17□□□□□ -1.9
SMG6-208ENST00000570874 RPS21P63220 83 aaKnown RBP3.17□□□□□ -1.9
SMG6-208ENST00000570874 RAE1P78406 368 aaKnown RBP3.17□□□□□ -1.9
SMG6-208ENST00000570874 MRPS21P82921 87 aaKnown RBP3.17□□□□□ -1.9
SMG6-208ENST00000570874 FOXE3Q13461 319 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 EXOSC2Q13868 293 aaKnown RBP3.17□□□□□ -1.9
SMG6-208ENST00000570874 KIAA0040Q15053 153 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 TBR1Q16650 682 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 ZBED5Q49AG3 693 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 GGTA1PQ4G0N0 100 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 TIGD2Q4W5G0 525 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 ATP6AP1LQ52LC2 224 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 PYCR3Q53H96 274 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 ZNF385BQ569K4 471 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 ZNF542PQ5EBM4 170 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 RABL3Q5HYI8 236 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 SPANXN4Q5MJ08 99 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 SLX4IPQ5VYV7 408 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 METRNLQ641Q3 311 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 HIST2H2AA3Q6FI13 130 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 GRHL2Q6ISB3 625 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 CAPN13Q6MZZ7 669 aaPredicted RBP3.17□□□□□ -1.9
SMG6-208ENST00000570874 TCTN3Q6NUS6 607 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 PLXDC2Q6UX71 529 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 FAM131AQ6UXB0 335 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 RBM44Q6ZP01 1051 aaKnown RBP3.17□□□□□ -1.9
SMG6-208ENST00000570874 SLCO4C1Q6ZQN7 724 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 ZNF621Q6ZSS3 439 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 COX15Q7KZN9 410 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 AMIGO1Q86WK6 493 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 ANGPTL5Q86XS5 388 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 MARCH9Q86YJ5 346 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 APRG1Q8IVJ8 170 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 DMRTC2Q8IXT2 367 aaPredicted RBP3.17□□□□□ -1.9
SMG6-208ENST00000570874 LGI3Q8N145 548 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 SLC22A18ASQ8N1D0 253 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 C10orf111Q8N326 155 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 SLC5A8Q8N695 610 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 IL22RA1Q8N6P7 574 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 CLDN22Q8N7P3 220 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 LINC01555Q8NAE3 123 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 LFNGQ8NES3 379 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 SDR9C7Q8NEX9 313 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 OR5AU1Q8NGC0 362 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 OR5L1Q8NGL2 311 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 OR4D5Q8NGN0 318 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 OR4A4PQ8NGN8 299 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 OR5AK3PQ8NH89 298 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 ZFP28Q8NHY6 868 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 GRPEL2Q8TAA5 225 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 FNDC8Q8TC99 324 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 C2CD4CQ8TF44 421 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 PATE1Q8WXA2 126 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 UCN3Q969E3 161 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 TSACCQ96A04 125 aaPredicted RBP3.17□□□□□ -1.9
SMG6-208ENST00000570874 TMEM125Q96AQ2 219 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 KLHDC7BQ96G42 594 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 TMEM80Q96HE8 168 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 Q96M66 194 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 Q96MT0 163 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 SORCS2Q96PQ0 1159 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 DOK1Q99704 481 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 MICU1Q9BPX6 476 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 MACROD1Q9BQ69 325 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 MRI1Q9BV20 369 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 GPR174Q9BXC1 333 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 TMPRSS13Q9BYE2 586 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 BARHL1Q9BZE3 327 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 AICDAQ9GZX7 198 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 IKZF5Q9H5V7 419 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 KAT8Q9H7Z6 458 aaKnown RBP3.17□□□□□ -1.9
SMG6-208ENST00000570874 ZFAND3Q9H8U3 227 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 TBC1D17Q9HA65 648 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 LRTM1Q9HBL6 345 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 TMEM138Q9NPI0 162 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 IFT46Q9NQC8 304 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 SDR39U1Q9NRG7 319 aaPredicted RBP3.17□□□□□ -1.9
SMG6-208ENST00000570874 PHPT1Q9NRX4 125 aaPredicted RBP3.17□□□□□ -1.9
SMG6-208ENST00000570874 NLKQ9UBE8 527 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 TAC3Q9UHF0 121 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 RIMS3Q9UJD0 308 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 MMP17Q9ULZ9 603 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 DHDHQ9UQ10 334 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 ASF1AQ9Y294 204 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 ALG5Q9Y673 324 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 ASCC3Q8N3C0 2202 aaKnown RBP3.17□□□□□ -1.9
SMG6-208ENST00000570874 NCKAP5O14513 1909 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 SEC16AO15027 2179 aa3.17□□□□□ -1.9
SMG6-208ENST00000570874 CACNA1EQ15878 2313 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 USP34Q70CQ2 3546 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms