RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 KIAA1549LQ6ZVL6 1849 aa13.75□□□□□ -0.21
USP43-202ENST00000570475 ZNF749O43361 778 aa13.75□□□□□ -0.21
USP43-202ENST00000570475 IL33O95760 270 aa13.75□□□□□ -0.21
USP43-202ENST00000570475 ABOP16442 354 aa13.75□□□□□ -0.21
USP43-202ENST00000570475 SLC37A1P57057 533 aa13.75□□□□□ -0.21
USP43-202ENST00000570475 ZNF704Q6ZNC4 412 aaPredicted RBP13.75□□□□□ -0.21
USP43-202ENST00000570475 CLEC1AQ8NC01 280 aa13.75□□□□□ -0.21
USP43-202ENST00000570475 C2CD4CQ8TF44 421 aa13.75□□□□□ -0.21
USP43-202ENST00000570475 FOXRED1Q96CU9 486 aaPredicted RBP13.75□□□□□ -0.21
USP43-202ENST00000570475 ZNF416Q9BWM5 594 aa13.75□□□□□ -0.21
USP43-202ENST00000570475 FOXQ1Q9C009 403 aa13.75□□□□□ -0.21
USP43-202ENST00000570475 NPTNQ9Y639 398 aa13.75□□□□□ -0.21
USP43-202ENST00000570475 RFPL4AA6NLU0 287 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 RFPL4AL1F8VTS6 287 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 CRABP1P29762 137 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 CD96P40200 585 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 FGL1Q08830 312 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 FUT7Q11130 342 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 CCINQ13939 588 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 CCDC157Q569K6 752 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 SLC36A1Q7Z2H8 476 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 SLC43A2Q8N370 569 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 OR1S2Q8NGQ3 325 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 OR52N5Q8NH56 324 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 OR1S1Q8NH92 325 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 CMTM3Q96MX0 182 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 ZCCHC4Q9H5U6 513 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 MRPL22Q9NWU5 206 aaKnown RBP13.74□□□□□ -0.21
USP43-202ENST00000570475 CSAG2Q9Y5P2 127 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 TRBV5-5A0A0J9YX44 114 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 A0A1W2PNR3 127 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 F5H5K5 113 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 NPIPB9F8W1W9 429 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 OR2A4O95047 310 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 ABHD16AO95870 558 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 DRD1P21728 446 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 SERPINF1P36955 418 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 CLVS2Q5SYC1 327 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 OR2W3Q7Z3T1 314 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 OR4K15Q8NH41 348 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 OR2A7Q96R45 310 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 CNTD2Q9H8S5 307 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 PVALBP20472 110 aaPredicted RBP13.74□□□□□ -0.21
USP43-202ENST00000570475 ABCD3P28288 659 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 BDKRB2P30411 391 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 SLC6A8P48029 635 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 CEBPGP53567 150 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 CLRN1P58418 232 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 RPS4XP62701 263 aaKnown RBP13.74□□□□□ -0.21
USP43-202ENST00000570475 SNTB1Q13884 538 aaKnown RBP13.74□□□□□ -0.21
USP43-202ENST00000570475 KIAA0895LQ68EN5 471 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 BIVMQ86UB2 503 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 RTN4RL2Q86UN3 420 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 ADAD2Q8NCV1 583 aaKnown RBP13.74□□□□□ -0.21
USP43-202ENST00000570475 ELP5Q8TE02 316 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 ASB17Q8WXJ9 295 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 ROBO4Q8WZ75 1007 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 SLC25A21Q9BQT8 299 aaPredicted RBP13.74□□□□□ -0.21
USP43-202ENST00000570475 ZNF304Q9HCX3 659 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 CTSFQ9UBX1 484 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 PCDHB10Q9UN67 800 aa13.74□□□□□ -0.21
USP43-202ENST00000570475 PRR19A6NJB7 356 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 A8MVM7 634 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 C5orf67F2Z3F1 127 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 AMY2BP19961 511 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 CAPZBP47756 277 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 DNM1P34Q6PK57 102 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 GKN2Q86XP6 184 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 RNF128Q8TEB7 428 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 ZDHHC12Q96GR4 267 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 NPAS1Q99742 590 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 GMEB2Q9UKD1 530 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 KLK13Q9UKR3 277 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 ADAP1O75689 374 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 IGHV4-34P06331 123 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 UBBP0CG47 229 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 UBCP0CG48 685 aaKnown RBP13.73□□□□□ -0.21
USP43-202ENST00000570475 RPS27AP62979 156 aaKnown RBP13.73□□□□□ -0.21
USP43-202ENST00000570475 UBA52P62987 128 aaKnown RBP13.73□□□□□ -0.21
USP43-202ENST00000570475 TMEM71Q6P5X7 295 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 BATF2Q8N1L9 274 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 LHFPL5Q8TAF8 219 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 PRRT1Q99946 306 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 METTL7AQ9H8H3 244 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 RHBDD3Q9Y3P4 386 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 FANCMQ8IYD8 2048 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 A0A0D9SG52 128 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 A0A1W2PP11 408 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 MEGF11A6BM72 1044 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 ZNF205O95201 554 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 AKR1C3P42330 323 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 POLR2HP52434 150 aaKnown RBP13.73□□□□□ -0.21
USP43-202ENST00000570475 LBX1P52954 281 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 FAM180AQ6UWF9 173 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 AIFM2Q9BRQ8 373 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 WDR13Q9H1Z4 485 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 TXNIPQ9H3M7 391 aa13.73□□□□□ -0.21
USP43-202ENST00000570475 G3V3Y1 287 aa13.72□□□□□ -0.21
USP43-202ENST00000570475 ZNF93P35789 620 aaPredicted RBP13.72□□□□□ -0.21
USP43-202ENST00000570475 ZNF273Q14593 569 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms