RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 SPATA5L1Q9BVQ7 753 aa8.54□□□□□ -1.04
CTDNEP1-202ENST00000570380 FN3KRPQ9HA64 309 aa8.54□□□□□ -1.04
CTDNEP1-202ENST00000570380 PPCSQ9HAB8 311 aa8.54□□□□□ -1.04
CTDNEP1-202ENST00000570380 INIPQ9NRY2 104 aa8.54□□□□□ -1.04
CTDNEP1-202ENST00000570380 RAP2CQ9Y3L5 183 aa8.54□□□□□ -1.04
CTDNEP1-202ENST00000570380 KPTNQ9Y664 436 aa8.54□□□□□ -1.04
CTDNEP1-202ENST00000570380 A0A1B0GWJ7 208 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 ELOVL7A1L3X0 281 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 MEGF11A6BM72 1044 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 CPSF4LA6NMK7 179 aaKnown RBP8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 H3BUX3 64 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 M0R3H8 397 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 SDHDO14521 159 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 NPFFO15130 113 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 FAM20BO75063 409 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 HLA-DPB1P04440 258 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 HTR5AP47898 357 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 DLX1P56177 255 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 CDK6Q00534 326 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 MPPED2Q15777 294 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 NPTX1Q15818 432 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 ENTPD8Q5MY95 495 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 REEP3Q6NUK4 255 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 METAP1DQ6UB28 335 aaPredicted RBP8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 FBXW12Q6X9E4 464 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 TSPYL5Q86VY4 417 aaPredicted RBP8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 KRT73Q86Y46 540 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 SLC30A8Q8IWU4 369 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 IFT20Q8IY31 132 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 PNKDQ8N490 385 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 BHLHE23Q8NDY6 225 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 MOSPD2Q8NHP6 518 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 UBLCP1Q8WVY7 318 aaPredicted RBP8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 PKNOX2Q96KN3 472 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 COG8Q96MW5 612 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 ZNF582Q96NG8 517 aaPredicted RBP8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 ZNF426Q9BUY5 554 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 PAIP1Q9H074 479 aaKnown RBP8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 PCDHAC1Q9H158 963 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 RAD21L1Q9H4I0 556 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 RANBP3Q9H6Z4 567 aaPredicted RBP8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 CNTD2Q9H8S5 307 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 MEPEQ9NQ76 525 aaPredicted RBP8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 SIRT7Q9NRC8 400 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 UFSP2Q9NUQ7 469 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 GAR1Q9NY12 217 aaKnown RBP8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 PTTG3PQ9NZH4 202 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 STX18Q9P2W9 335 aaKnown RBP8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 SLC13A4Q9UKG4 626 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 ANGPT4Q9Y264 503 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 MAB21L2Q9Y586 359 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 PCDHGB5Q9Y5G0 923 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 U3KQK5 164 aa8.53□□□□□ -1.04
CTDNEP1-202ENST00000570380 A0A1W2PPL8 197 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 TLDC2A0PJX2 215 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 WDR91A4D1P6 747 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 GMNCA6NCL1 334 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 C12orf71A8MTZ7 269 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 LGALS8O00214 317 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 DVL1O14640 695 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 DOK2O60496 412 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 ECDO95905 644 aaPredicted RBP8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 PAHP00439 452 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 HOXB9P17482 250 aaPredicted RBP8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 MSR1P21757 451 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 EEF1B2P24534 225 aaKnown RBP8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 RAD23AP54725 363 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 KLRD1Q13241 179 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 KCNJ8Q15842 424 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 LY6EQ16553 131 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 C6orf10Q5SRN2 563 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 PRAMEF6Q5VXH4 476 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 CRIP3Q6Q6R5 217 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 FGFRL1Q8N441 504 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 BOLLQ8N9W6 283 aaKnown RBP8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 PCYOX1LQ8NBM8 494 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 PAPD5Q8NDF8 572 aaKnown RBP8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 OR11L1Q8NGX0 322 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 ADAMTS16Q8TE57 1224 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 ERGIC1Q969X5 290 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 CLPTM1LQ96KA5 538 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 SSX3Q99909 188 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 ALG12Q9BV10 488 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 CENPHQ9H3R5 247 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 RMND5AQ9H871 391 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 EMC7Q9NPA0 242 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 SERTAD4Q9NUC0 356 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 TMEM100Q9NV29 134 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 PNPOQ9NVS9 261 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 DNAJB11Q9UBS4 358 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 RPUSD1Q9UJJ7 312 aaKnown RBP8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 SLC7A7Q9UM01 511 aa8.52□□□□□ -1.05
CTDNEP1-202ENST00000570380 STAB2Q8WWQ8 2551 aa8.51□□□□□ -1.05
CTDNEP1-202ENST00000570380 MEIOCA2RUB1 952 aa8.51□□□□□ -1.05
CTDNEP1-202ENST00000570380 PRORSD1PA6NEY8 169 aa8.51□□□□□ -1.05
CTDNEP1-202ENST00000570380 IQCF6A8MYZ5 107 aa8.51□□□□□ -1.05
CTDNEP1-202ENST00000570380 SGCEO43556 437 aa8.51□□□□□ -1.05
CTDNEP1-202ENST00000570380 SLC22A3O75751 556 aa8.51□□□□□ -1.05
CTDNEP1-202ENST00000570380 GYPAP02724 150 aa8.51□□□□□ -1.05
CTDNEP1-202ENST00000570380 SERPINE1P05121 402 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms