RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 RER1O15258 196 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 SURF4O15260 269 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 IGF2P01344 180 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 RAP1BP61224 184 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 RAP1AP62834 184 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 ZNF404Q494X3 552 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 BEND6Q5SZJ8 279 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-220ENST00000569827 AGBL2Q5U5Z8 902 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 PRAMEF6Q5VXH4 476 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 OLFML2AQ68BL7 652 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 HIST2H2BDQ6DRA6 164 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 OAFQ86UD1 273 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 PDZD9Q8IXQ8 264 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 C1orf174Q8IYL3 243 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 BOLLQ8N9W6 283 aaKnown RBP10.05□□□□□ -0.8
CAPN3-220ENST00000569827 OR8B3Q8NGG8 313 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 OR1F12Q8NHA8 337 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 C10orf82Q8WW14 230 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 ZNF570Q96NI8 536 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 OR8B2Q96RD0 313 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 SYT4Q9H2B2 425 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 UFSP2Q9NUQ7 469 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 MIOXQ9UGB7 285 aa10.05□□□□□ -0.8
CAPN3-220ENST00000569827 COA3Q9Y2R0 106 aaPredicted RBP10.05□□□□□ -0.8
CAPN3-220ENST00000569827 OR6C6A6NF89 314 aa10.04□□□□□ -0.8
CAPN3-220ENST00000569827 SOCS2O14508 198 aa10.04□□□□□ -0.8
CAPN3-220ENST00000569827 FFAR1O14842 300 aa10.04□□□□□ -0.8
CAPN3-220ENST00000569827 TSPAN15O95858 294 aa10.04□□□□□ -0.8
CAPN3-220ENST00000569827 CRYBA1P05813 215 aa10.04□□□□□ -0.8
CAPN3-220ENST00000569827 MELTFP08582 738 aa10.04□□□□□ -0.8
CAPN3-220ENST00000569827 VIMP08670 466 aaKnown RBP10.04□□□□□ -0.8
CAPN3-220ENST00000569827 COX5BP10606 129 aa10.04□□□□□ -0.8
CAPN3-220ENST00000569827 RAC2P15153 192 aa10.04□□□□□ -0.8
CAPN3-220ENST00000569827 ST3GAL3Q11203 375 aa10.04□□□□□ -0.8
CAPN3-220ENST00000569827 GPR157Q5UAW9 335 aa10.04□□□□□ -0.8
CAPN3-220ENST00000569827 FAM205BPQ63HN1 556 aa10.04□□□□□ -0.8
CAPN3-220ENST00000569827 WDR25Q64LD2 544 aaPredicted RBP10.04□□□□□ -0.8
CAPN3-220ENST00000569827 CORO6Q6QEF8 472 aa10.04□□□□□ -0.8
CAPN3-220ENST00000569827 SYT9Q86SS6 491 aa10.04□□□□□ -0.8
CAPN3-220ENST00000569827 OR8G5Q8NG78 346 aa10.04□□□□□ -0.8
CAPN3-220ENST00000569827 OR4F5Q8NH21 305 aa10.04□□□□□ -0.8
CAPN3-220ENST00000569827 PTP4A1Q93096 173 aa10.04□□□□□ -0.8
CAPN3-220ENST00000569827 ZNF583Q96ND8 569 aa10.04□□□□□ -0.8
CAPN3-220ENST00000569827 GRHPRQ9UBQ7 328 aa10.04□□□□□ -0.8
CAPN3-220ENST00000569827 CLN8Q9UBY8 286 aa10.04□□□□□ -0.8
CAPN3-220ENST00000569827 TMCC3Q9ULS5 477 aa10.04□□□□□ -0.8
CAPN3-220ENST00000569827 POLR1DQ9Y2S0 133 aa10.04□□□□□ -0.8
CAPN3-220ENST00000569827 MMP24Q9Y5R2 645 aa10.04□□□□□ -0.8
CAPN3-220ENST00000569827 KIR2DS1A0A191URI9 304 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 PRSS37A4D1T9 235 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 MRASO14807 208 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 SLC16A7O60669 478 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 FAM20BO75063 409 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 ANOS1P23352 680 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 CENPAP49450 140 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 SRP9P49458 86 aaKnown RBP10.03□□□□□ -0.8
CAPN3-220ENST00000569827 PRB3Q04118 309 aaPredicted RBP10.03□□□□□ -0.8
CAPN3-220ENST00000569827 PRKCDQ05655 676 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 AQP6Q13520 282 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 KRR1Q13601 381 aaKnown RBP10.03□□□□□ -0.8
CAPN3-220ENST00000569827 CYLC2Q14093 348 aaPredicted RBP10.03□□□□□ -0.8
CAPN3-220ENST00000569827 SFRP4Q6FHJ7 346 aaPredicted RBP10.03□□□□□ -0.8
CAPN3-220ENST00000569827 ASPHD2Q6ICH7 369 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 PTCHD4Q6ZW05 846 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 FAM122BQ7Z309 247 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 OR13G1Q8NGZ3 307 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 FNDC8Q8TC99 324 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 FAM46AQ96IP4 442 aaKnown RBP10.03□□□□□ -0.8
CAPN3-220ENST00000569827 PLEKHA8Q96JA3 519 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 TSSK2Q96PF2 358 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 TECTBQ96PL2 329 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 TBX15Q96SF7 602 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 CITED1Q99966 193 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 FNDC11Q9BVV2 318 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 POLR2J2Q9GZM3 115 aaKnown RBP10.03□□□□□ -0.8
CAPN3-220ENST00000569827 POLR2J3Q9H1A7 115 aaKnown RBP10.03□□□□□ -0.8
CAPN3-220ENST00000569827 RASSF4Q9H2L5 321 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 MMADHCQ9H3L0 296 aaPredicted RBP10.03□□□□□ -0.8
CAPN3-220ENST00000569827 BEX1Q9HBH7 125 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 CTSZQ9UBR2 303 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 RPS6KA6Q9UK32 745 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 NOTCH3Q9UM47 2321 aa10.03□□□□□ -0.8
CAPN3-220ENST00000569827 A0A087WUU8 490 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 CLPSL1A2RUU4 121 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 XKRYO14609 159 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 IGHV4-59P01825 116 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 CD14P08571 375 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 PPIAL4GP0DN37 164 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 FPR3P25089 353 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 KDELR2P33947 212 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 CFHR2P36980 270 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 MAB21L1Q13394 359 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 MPPED2Q15777 294 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 FBXW12Q6X9E4 464 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 Q6YL49 198 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 ZNF730Q6ZMV8 503 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 ZNF841Q6ZN19 808 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 NLRC3Q7RTR2 1065 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 LINC00346Q8IVM7 164 aa10.02□□□□□ -0.81
CAPN3-220ENST00000569827 OFCC1Q8IZS5 231 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms