RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 RERGLQ9H628 205 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 MAGIXQ9H6Y5 334 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 ZNF665Q9H7R5 613 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 RPRD1BQ9NQG5 326 aaKnown RBP6.62□□□□□ -1.35
CDH3-209ENST00000569080 G6PC2Q9NQR9 355 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 TUBG2Q9NRH3 451 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 CYSLTR2Q9NS75 346 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 FAM53CQ9NYF3 392 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 IL20Q9NYY1 176 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 TMEFF2Q9UIK5 374 aaPredicted RBP6.62□□□□□ -1.35
CDH3-209ENST00000569080 ZDHHC8Q9ULC8 765 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 STARD10Q9Y365 291 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 DYSFO75923 2080 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 B2RBV5 119 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 ACOT8O14734 319 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 IDH3BO43837 385 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 TIMM8AO60220 97 aaPredicted RBP6.61□□□□□ -1.35
CDH3-209ENST00000569080 KRT36O76013 467 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 RENP00797 406 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 AVPP01185 164 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 IGHV2-70P01814 119 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 RAC2P15153 192 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 GSTM3P21266 225 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 IFNGR2P38484 337 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 MNAT1P51948 309 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 MXRA7P84157 204 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 TEKQ02763 1124 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 MVKQ03426 396 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 PPP1R8Q12972 351 aaKnown RBP6.61□□□□□ -1.35
CDH3-209ENST00000569080 TRIM25Q14258 630 aaKnown RBP6.61□□□□□ -1.35
CDH3-209ENST00000569080 HLXQ14774 488 aaPredicted RBP6.61□□□□□ -1.35
CDH3-209ENST00000569080 HFEQ30201 348 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 CLEC12AQ5QGZ9 265 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 SLC35F1Q5T1Q4 408 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 ARL9Q6T311 187 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 LYPD4Q6UWN0 246 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 RASSF6Q6ZTQ3 369 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 GLCCI1Q86VQ1 547 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 JAZF1Q86VZ6 243 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 LINC00346Q8IVM7 164 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 ZNF283Q8N7M2 679 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 AQP11Q8NBQ7 271 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 CCDC197Q8NCU1 140 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 GJC3Q8NFK1 279 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 OR52E2Q8NGJ4 325 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 OR4Q3Q8NH05 313 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 OR51F2Q8NH61 342 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 GNPDA2Q8TDQ7 276 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 HAVCR1Q96D42 359 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 CMBLQ96DG6 245 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 ASB9Q96DX5 294 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 NSL1Q96IY1 281 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 MAP6Q96JE9 813 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 CLPTM1LQ96KA5 538 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 DCLRE1CQ96SD1 692 aaKnown RBP6.61□□□□□ -1.35
CDH3-209ENST00000569080 DIRC2Q96SL1 478 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 C1QTNF5Q9BXJ0 243 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 LPAR2Q9HBW0 351 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 DECR2Q9NUI1 292 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 HIF1ANQ9NWT6 349 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 CYB5R1Q9UHQ9 305 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 TMCC3Q9ULS5 477 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 PRPF19Q9UMS4 504 aaKnown RBP6.61□□□□□ -1.35
CDH3-209ENST00000569080 POLR1DQ9Y2S0 133 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 GRIP1Q9Y3R0 1128 aa6.61□□□□□ -1.35
CDH3-209ENST00000569080 TRAV20A0A0B4J274 112 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 TNFRSF11BO00300 401 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 DYNC1I1O14576 645 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 MLNRO43193 412 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 TPD52L2O43399 206 aaKnown RBP6.6□□□□□ -1.35
CDH3-209ENST00000569080 GASTP01350 101 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 ACSM4P0C7M7 580 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 NOS3P29474 1203 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 OTX1P32242 354 aaPredicted RBP6.6□□□□□ -1.35
CDH3-209ENST00000569080 PYCR1P32322 319 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 RPS27P42677 84 aaKnown RBP6.6□□□□□ -1.35
CDH3-209ENST00000569080 RGS6P49758 472 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 MMP16P51512 607 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 TNFAIP6P98066 277 aaPredicted RBP6.6□□□□□ -1.35
CDH3-209ENST00000569080 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.6□□□□□ -1.35
CDH3-209ENST00000569080 PCK2Q16822 640 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 OR2T5Q6IEZ7 315 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 RPL13AP3Q6NVV1 102 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.6□□□□□ -1.35
CDH3-209ENST00000569080 ADGRG5Q8IZF4 528 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 LNX2Q8N448 690 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 CYB561A3Q8NBI2 242 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 SLC37A3Q8NCC5 494 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 SEMA6DQ8NFY4 1073 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 OR10AD1Q8NGE0 317 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 OR2T29Q8NH02 315 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 ITLN1Q8WWA0 313 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 TMEM158Q8WZ71 300 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 CCL17Q92583 94 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 APOBEC3DQ96AK3 386 aaPredicted RBP6.6□□□□□ -1.35
CDH3-209ENST00000569080 CCDC124Q96CT7 223 aaKnown RBP6.6□□□□□ -1.35
CDH3-209ENST00000569080 RAB39BQ96DA2 213 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 COG8Q96MW5 612 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 ATF6BQ99941 703 aa6.6□□□□□ -1.35
CDH3-209ENST00000569080 RBM4Q9BWF3 364 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms