RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 FOXD3Q9UJU5 478 aaPredicted RBP12.92□□□□□ -0.34
COMMD4-221ENST00000567935 FLVCR1Q9Y5Y0 555 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 KCNMB2Q9Y691 235 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 V9GYH0 126 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 NCKAP5O14513 1909 aa12.92□□□□□ -0.34
COMMD4-221ENST00000567935 MED13LQ71F56 2210 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 IGKV3D-15A0A087WSY6 115 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 A0A0G2JK05 382 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 OR6C65A6NJZ3 312 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 ZNF716A6NP11 495 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 ZNF878C9JN71 531 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 MKRN2OSH3BPM6 223 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 DVL2O14641 736 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 DHHO43323 396 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 SRSF10O75494 262 aaKnown RBP12.91□□□□□ -0.34
COMMD4-221ENST00000567935 SYNGR4O95473 234 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 F10P00742 488 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 ISG15P05161 165 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 CD2P06729 351 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 OCM2P0CE71 109 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 UBCP0CG48 685 aaKnown RBP12.91□□□□□ -0.34
COMMD4-221ENST00000567935 MSR1P21757 451 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 ACHEP22303 614 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 TALDO1P37837 337 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 KIR3DL2P43630 455 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 LHX2P50458 406 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 CAV3P56539 151 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 RIN1Q13671 783 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 STK11Q15831 433 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 TRIM16LQ309B1 348 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 PRR30Q53SZ7 412 aaPredicted RBP12.91□□□□□ -0.34
COMMD4-221ENST00000567935 ZNF766Q5HY98 468 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 IDNKQ5T6J7 187 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 RIPPLY2Q5TAB7 128 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 TMEM244Q5VVB8 128 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 OR7E24Q6IFN5 339 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 PRSS35Q8N3Z0 413 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 ZIC4Q8N9L1 334 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 SETD6Q8TBK2 473 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 SLAMF6Q96DU3 332 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 ZNF385AQ96PM9 386 aaKnown RBP12.91□□□□□ -0.34
COMMD4-221ENST00000567935 NELFAQ9H3P2 528 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 SEC61A2Q9H9S3 476 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 RNF122Q9H9V4 155 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 EMC3Q9P0I2 261 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 DAPK2Q9UIK4 370 aa12.91□□□□□ -0.34
COMMD4-221ENST00000567935 GDF2Q9UK05 429 aaPredicted RBP12.91□□□□□ -0.34
COMMD4-221ENST00000567935 ING1Q9UK53 422 aaPredicted RBP12.91□□□□□ -0.34
COMMD4-221ENST00000567935 IGHV3-15A0A0B4J1V0 119 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 ACOD1A6NK06 481 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 A6NL46 340 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 PIN1P1O15428 100 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 TBX1O43435 398 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 NCR1O76036 304 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 EPXP11678 715 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 ZNF708P17019 499 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 KLK2P20151 261 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 NPR2P20594 1047 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 THBS2P35442 1172 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 MAGEA5P43359 124 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 EVX1P49640 407 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 TNFSF10P50591 281 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 SCAND1P57086 179 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 PPIAP62937 165 aaKnown RBP12.9□□□□□ -0.34
COMMD4-221ENST00000567935 GRB2P62993 217 aaKnown RBP12.9□□□□□ -0.34
COMMD4-221ENST00000567935 MRPS34P82930 218 aaKnown RBP12.9□□□□□ -0.34
COMMD4-221ENST00000567935 SLC10A1Q14973 349 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 OXA1LQ15070 435 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 FAM131AQ6UXB0 335 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 DCDC5Q6ZRR9 648 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 FCRLAQ7L513 359 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 AAED1Q7RTV5 226 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 NR2C2APQ86WQ0 139 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 LYSMD2Q8IV50 215 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 UBQLNLQ8IYU4 475 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 IL17RDQ8NFM7 739 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 ABTB1Q969K4 478 aaPredicted RBP12.9□□□□□ -0.34
COMMD4-221ENST00000567935 COX4I2Q96KJ9 171 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 SOSTQ9BQB4 213 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 WACQ9BTA9 647 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 HES7Q9BYE0 225 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 ULBP2Q9BZM5 246 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 SRRQ9GZT4 340 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 SP140LQ9H930 580 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 TBCCD1Q9NVR7 557 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 MCTS1Q9ULC4 181 aaKnown RBP12.9□□□□□ -0.34
COMMD4-221ENST00000567935 HHLA2Q9UM44 414 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 LHFPL6Q9Y693 200 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 MTORP42345 2549 aa12.9□□□□□ -0.34
COMMD4-221ENST00000567935 TMEM269A0A1B0GVZ9 245 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 SMIM30A4D0T7 59 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 AIPO00170 330 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 PTTG1O95997 202 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 APOA1P02647 267 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 APOC1P02654 83 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 FSTP19883 344 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 CTSSP25774 331 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 CFPP27918 469 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 STARP49675 285 aa12.89□□□□□ -0.35
COMMD4-221ENST00000567935 CLDN15P56746 228 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms