RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 CDC40O60508 579 aaKnown RBP eCLIP4.71□□□□□ -1.66
CAPN3-217ENST00000567817 EIF4E2O60573 245 aaKnown RBP4.71□□□□□ -1.66
CAPN3-217ENST00000567817 DNAJB6O75190 326 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 PEX14O75381 377 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 RENP00797 406 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 MT-ATP6P00846 226 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 CSF2P04141 144 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 CT62P0C5K7 136 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 CT45A8P0DMV1 189 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 CT45A9P0DMV2 189 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 TMEM225BP0DP42 221 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 LIPCP11150 499 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 ANXA3P12429 323 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 HIST1H1CP16403 213 aaKnown RBP4.71□□□□□ -1.66
CAPN3-217ENST00000567817 SPI1P17947 270 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 CD82P27701 267 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 SHC1P29353 583 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 FAUP35544 74 aaKnown RBP4.71□□□□□ -1.66
CAPN3-217ENST00000567817 CD79BP40259 229 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 PPICP45877 212 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 CAV3P56539 151 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 OR12D2P58182 307 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 GNG2P59768 71 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 IFITM2Q01629 132 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 ID2Q02363 134 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 SSBP1Q04837 148 aaKnown RBP4.71□□□□□ -1.66
CAPN3-217ENST00000567817 SNTB2Q13425 540 aaKnown RBP4.71□□□□□ -1.66
CAPN3-217ENST00000567817 FZD2Q14332 565 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 GPR176Q14439 515 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 MFSD13AQ14CX5 517 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 EXOSC7Q15024 291 aaKnown RBP4.71□□□□□ -1.66
CAPN3-217ENST00000567817 TOMM20Q15388 145 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 P2RY14Q15391 338 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 SF3B4Q15427 424 aaKnown RBP eCLIP4.71□□□□□ -1.66
CAPN3-217ENST00000567817 SHBQ15464 509 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 ETFDHQ16134 617 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 CARTPTQ16568 116 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 ZNF74Q16587 644 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 KLHL26Q53HC5 615 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 ALG10Q5BKT4 473 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 CT45A2Q5DJT8 189 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 ELFN2Q5R3F8 820 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 UNQ9370/PRO34162Q6UXP9 181 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 BTN2A1Q7KYR7 527 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 SLC16A9Q7RTY1 509 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 HDDC2Q7Z4H3 204 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 MEX3DQ86XN8 651 aaKnown RBP4.71□□□□□ -1.66
CAPN3-217ENST00000567817 SLC22A18ASQ8N1D0 253 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 TMEM99Q8N816 258 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 BCORP1Q8N888 145 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 YIPF7Q8N8F6 280 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 ZNF615Q8N8J6 731 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 C17orf47Q8NEP4 570 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 OR4M1Q8NGD0 313 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 OR5T3Q8NGG3 340 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 OR9A4Q8NGU2 314 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 OR6S1Q8NH40 331 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 C16orf52Q8NHV5 167 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 OSR1Q8TAX0 266 aaPredicted RBP4.71□□□□□ -1.66
CAPN3-217ENST00000567817 SMIM4Q8WVI0 70 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 ASB17Q8WXJ9 295 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 DAZLQ92904 295 aaKnown RBP4.71□□□□□ -1.66
CAPN3-217ENST00000567817 HGDQ93099 445 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 C3orf49Q96BT1 292 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 UPRTQ96BW1 309 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 PELI1Q96FA3 418 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 S100A16Q96FQ6 103 aaKnown RBP4.71□□□□□ -1.66
CAPN3-217ENST00000567817 SENP5Q96HI0 755 aaPredicted RBP4.71□□□□□ -1.66
CAPN3-217ENST00000567817 MED30Q96HR3 178 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 RNF170Q96K19 258 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 DDOQ99489 341 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 B3GNT4Q9C0J1 378 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 MED28Q9H204 178 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 FKRPQ9H9S5 495 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 RANGRFQ9HD47 186 aaPredicted RBP4.71□□□□□ -1.66
CAPN3-217ENST00000567817 B3GAT2Q9NPZ5 323 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 NANSQ9NR45 359 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 ACOXLQ9NUZ1 547 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 FLRT3Q9NZU0 649 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 NLKQ9UBE8 527 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 NTNG1Q9Y2I2 539 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 MRPS2Q9Y399 296 aaKnown RBP4.71□□□□□ -1.66
CAPN3-217ENST00000567817 LRRK1Q38SD2 2015 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 TRPM6Q9BX84 2022 aa4.71□□□□□ -1.66
CAPN3-217ENST00000567817 RP1L1Q8IWN7 2480 aaPredicted RBP4.7□□□□□ -1.66
CAPN3-217ENST00000567817 CCDC187A0A096LP49 1063 aa4.7□□□□□ -1.66
CAPN3-217ENST00000567817 A0A0G2JMP0 313 aa4.7□□□□□ -1.66
CAPN3-217ENST00000567817 A0A0X1KG70 313 aa4.7□□□□□ -1.66
CAPN3-217ENST00000567817 TUBAL3A6NHL2 446 aa4.7□□□□□ -1.66
CAPN3-217ENST00000567817 TMEM212A6NML5 194 aa4.7□□□□□ -1.66
CAPN3-217ENST00000567817 IFITM5A6NNB3 132 aa4.7□□□□□ -1.66
CAPN3-217ENST00000567817 C17orf105B2RV13 164 aa4.7□□□□□ -1.66
CAPN3-217ENST00000567817 SCAMP1O15126 338 aa4.7□□□□□ -1.66
CAPN3-217ENST00000567817 TO15178 435 aa4.7□□□□□ -1.66
CAPN3-217ENST00000567817 EEF1E1O43324 174 aaKnown RBP4.7□□□□□ -1.66
CAPN3-217ENST00000567817 OR2T1O43869 369 aa4.7□□□□□ -1.66
CAPN3-217ENST00000567817 OR2B3O76000 313 aa4.7□□□□□ -1.66
CAPN3-217ENST00000567817 TGM6O95932 706 aa4.7□□□□□ -1.66
CAPN3-217ENST00000567817 HIST1H2ABP04908 130 aa4.7□□□□□ -1.66
CAPN3-217ENST00000567817 EIF4EP06730 217 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms