RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 RAC2P15153 192 aa12.88□□□□□ -0.35
PALB2-205ENST00000567003 CTLA4P16410 223 aa12.88□□□□□ -0.35
PALB2-205ENST00000567003 YAP1P46937 504 aaKnown RBP12.88□□□□□ -0.35
PALB2-205ENST00000567003 RAP1BP61224 184 aa12.88□□□□□ -0.35
PALB2-205ENST00000567003 RAP1AP62834 184 aa12.88□□□□□ -0.35
PALB2-205ENST00000567003 CCDC92Q53HC0 331 aaPredicted RBP12.88□□□□□ -0.35
PALB2-205ENST00000567003 MESTQ5EB52 335 aa12.88□□□□□ -0.35
PALB2-205ENST00000567003 FAM205BPQ63HN1 556 aa12.88□□□□□ -0.35
PALB2-205ENST00000567003 WDR25Q64LD2 544 aaPredicted RBP12.88□□□□□ -0.35
PALB2-205ENST00000567003 NRMQ8IXM6 262 aa12.88□□□□□ -0.35
PALB2-205ENST00000567003 FNDC8Q8TC99 324 aa12.88□□□□□ -0.35
PALB2-205ENST00000567003 C10orf82Q8WW14 230 aa12.88□□□□□ -0.35
PALB2-205ENST00000567003 WDR76Q9H967 626 aa12.88□□□□□ -0.35
PALB2-205ENST00000567003 RHCGQ9UBD6 479 aa12.88□□□□□ -0.35
PALB2-205ENST00000567003 CLN8Q9UBY8 286 aa12.88□□□□□ -0.35
PALB2-205ENST00000567003 BAG5Q9UL15 447 aa12.88□□□□□ -0.35
PALB2-205ENST00000567003 A4GNTQ9UNA3 340 aa12.88□□□□□ -0.35
PALB2-205ENST00000567003 OR6C6A6NF89 314 aa12.87□□□□□ -0.35
PALB2-205ENST00000567003 TIMM23O14925 209 aa12.87□□□□□ -0.35
PALB2-205ENST00000567003 HLA-DPB1P04440 258 aa12.87□□□□□ -0.35
PALB2-205ENST00000567003 SRP9P49458 86 aaKnown RBP12.87□□□□□ -0.35
PALB2-205ENST00000567003 NANOGP8Q6NSW7 305 aa12.87□□□□□ -0.35
PALB2-205ENST00000567003 ZNF841Q6ZN19 808 aa12.87□□□□□ -0.35
PALB2-205ENST00000567003 NLRC3Q7RTR2 1065 aa12.87□□□□□ -0.35
PALB2-205ENST00000567003 CALHM3Q86XJ0 350 aa12.87□□□□□ -0.35
PALB2-205ENST00000567003 OR8G5Q8NG78 346 aa12.87□□□□□ -0.35
PALB2-205ENST00000567003 OR13G1Q8NGZ3 307 aa12.87□□□□□ -0.35
PALB2-205ENST00000567003 OR1F12Q8NHA8 337 aa12.87□□□□□ -0.35
PALB2-205ENST00000567003 Q96M85 177 aa12.87□□□□□ -0.35
PALB2-205ENST00000567003 TBX15Q96SF7 602 aa12.87□□□□□ -0.35
PALB2-205ENST00000567003 POLR2J2Q9GZM3 115 aaKnown RBP12.87□□□□□ -0.35
PALB2-205ENST00000567003 POLR2J3Q9H1A7 115 aaKnown RBP12.87□□□□□ -0.35
PALB2-205ENST00000567003 RERGLQ9H628 205 aa12.87□□□□□ -0.35
PALB2-205ENST00000567003 NOX4Q9NPH5 578 aa12.87□□□□□ -0.35
PALB2-205ENST00000567003 ASH2LQ9UBL3 628 aa12.87□□□□□ -0.35
PALB2-205ENST00000567003 RNF114Q9Y508 228 aa12.87□□□□□ -0.35
PALB2-205ENST00000567003 J3KTA2 159 aa12.86□□□□□ -0.35
PALB2-205ENST00000567003 IFNL4K9M1U5 179 aa12.86□□□□□ -0.35
PALB2-205ENST00000567003 RER1O15258 196 aa12.86□□□□□ -0.35
PALB2-205ENST00000567003 ZNF26P17031 533 aaPredicted RBP12.86□□□□□ -0.35
PALB2-205ENST00000567003 TUBG1P23258 451 aa12.86□□□□□ -0.35
PALB2-205ENST00000567003 CFHR2P36980 270 aa12.86□□□□□ -0.35
PALB2-205ENST00000567003 LRRC23Q53EV4 343 aaPredicted RBP12.86□□□□□ -0.35
PALB2-205ENST00000567003 CYBRD1Q53TN4 286 aa12.86□□□□□ -0.35
PALB2-205ENST00000567003 TTMPQ5BVD1 217 aa12.86□□□□□ -0.35
PALB2-205ENST00000567003 FBXW12Q6X9E4 464 aa12.86□□□□□ -0.35
PALB2-205ENST00000567003 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.86□□□□□ -0.35
PALB2-205ENST00000567003 OAFQ86UD1 273 aa12.86□□□□□ -0.35
PALB2-205ENST00000567003 LINC01006Q8NI28 216 aa12.86□□□□□ -0.35
PALB2-205ENST00000567003 FAM110DQ8TAY7 271 aaPredicted RBP12.86□□□□□ -0.35
PALB2-205ENST00000567003 RASD2Q96D21 266 aa12.86□□□□□ -0.35
PALB2-205ENST00000567003 TPD52L3Q96J77 140 aa12.86□□□□□ -0.35
PALB2-205ENST00000567003 ZNF582Q96NG8 517 aaPredicted RBP12.86□□□□□ -0.35
PALB2-205ENST00000567003 TECTBQ96PL2 329 aa12.86□□□□□ -0.35
PALB2-205ENST00000567003 SLC30A2Q9BRI3 323 aa12.86□□□□□ -0.35
PALB2-205ENST00000567003 RABEP2Q9H5N1 569 aa12.86□□□□□ -0.35
PALB2-205ENST00000567003 TUBG2Q9NRH3 451 aa12.86□□□□□ -0.35
PALB2-205ENST00000567003 TMCC3Q9ULS5 477 aa12.86□□□□□ -0.35
PALB2-205ENST00000567003 SLC22A31A6NKX4 558 aa12.85□□□□□ -0.35
PALB2-205ENST00000567003 EFCAB9A8MZ26 197 aa12.85□□□□□ -0.35
PALB2-205ENST00000567003 PHYHO14832 338 aa12.85□□□□□ -0.35
PALB2-205ENST00000567003 ENSAO43768 121 aaKnown RBP12.85□□□□□ -0.35
PALB2-205ENST00000567003 GPR137BO60478 399 aa12.85□□□□□ -0.35
PALB2-205ENST00000567003 IGHV4-59P01825 116 aa12.85□□□□□ -0.35
PALB2-205ENST00000567003 RPL4P36578 427 aaKnown RBP12.85□□□□□ -0.35
PALB2-205ENST00000567003 GPR4P46093 362 aa12.85□□□□□ -0.35
PALB2-205ENST00000567003 SLC9A3P48764 834 aa12.85□□□□□ -0.35
PALB2-205ENST00000567003 ST3GAL3Q11203 375 aa12.85□□□□□ -0.35
PALB2-205ENST00000567003 AQP6Q13520 282 aa12.85□□□□□ -0.35
PALB2-205ENST00000567003 PRAMEF6Q5VXH4 476 aa12.85□□□□□ -0.35
PALB2-205ENST00000567003 HIST2H2BDQ6DRA6 164 aa12.85□□□□□ -0.35
PALB2-205ENST00000567003 ZNF620Q6ZNG0 422 aa12.85□□□□□ -0.35
PALB2-205ENST00000567003 TMEM86BQ8N661 226 aa12.85□□□□□ -0.35
PALB2-205ENST00000567003 PRRC1Q96M27 445 aa12.85□□□□□ -0.35
PALB2-205ENST00000567003 MMADHCQ9H3L0 296 aaPredicted RBP12.85□□□□□ -0.35
PALB2-205ENST00000567003 UFSP2Q9NUQ7 469 aa12.85□□□□□ -0.35
PALB2-205ENST00000567003 CTSZQ9UBR2 303 aa12.85□□□□□ -0.35
PALB2-205ENST00000567003 COA3Q9Y2R0 106 aaPredicted RBP12.85□□□□□ -0.35
PALB2-205ENST00000567003 SNX13Q9Y5W8 968 aa12.85□□□□□ -0.35
PALB2-205ENST00000567003 NBEAL2Q6ZNJ1 2754 aa12.85□□□□□ -0.35
PALB2-205ENST00000567003 TEX13CA0A0J9YWL9 993 aa12.84□□□□□ -0.35
PALB2-205ENST00000567003 CENPVL3A0A0U1RRI6 287 aa12.84□□□□□ -0.35
PALB2-205ENST00000567003 PRSS37A4D1T9 235 aa12.84□□□□□ -0.35
PALB2-205ENST00000567003 LRRC30A6NM36 301 aa12.84□□□□□ -0.35
PALB2-205ENST00000567003 FXYD1O00168 92 aa12.84□□□□□ -0.35
PALB2-205ENST00000567003 CDC42EP2O14613 210 aa12.84□□□□□ -0.35
PALB2-205ENST00000567003 TNFRSF13BO14836 293 aaPredicted RBP12.84□□□□□ -0.35
PALB2-205ENST00000567003 FAM20BO75063 409 aa12.84□□□□□ -0.35
PALB2-205ENST00000567003 MMP9P14780 707 aa12.84□□□□□ -0.35
PALB2-205ENST00000567003 CPT2P23786 658 aa12.84□□□□□ -0.35
PALB2-205ENST00000567003 PROK1P58294 105 aa12.84□□□□□ -0.35
PALB2-205ENST00000567003 PRKCDQ05655 676 aa12.84□□□□□ -0.35
PALB2-205ENST00000567003 DBPQ10586 325 aaPredicted RBP12.84□□□□□ -0.35
PALB2-205ENST00000567003 TAF9Q16594 264 aa12.84□□□□□ -0.35
PALB2-205ENST00000567003 ZNF181Q2M3W8 571 aa12.84□□□□□ -0.35
PALB2-205ENST00000567003 TBPL2Q6SJ96 375 aa12.84□□□□□ -0.35
PALB2-205ENST00000567003 DCDC5Q6ZRR9 648 aa12.84□□□□□ -0.35
PALB2-205ENST00000567003 PDZD9Q8IXQ8 264 aa12.84□□□□□ -0.35
PALB2-205ENST00000567003 BOLLQ8N9W6 283 aaKnown RBP12.84□□□□□ -0.35
PALB2-205ENST00000567003 PCYOX1LQ8NBM8 494 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms