RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 RFX4Q33E94 735 aa15.44■□□□□ 0.06
USB1-213ENST00000566292 USP43Q70EL4 1123 aa15.44■□□□□ 0.06
USB1-213ENST00000566292 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.44■□□□□ 0.06
USB1-213ENST00000566292 OR5AS1Q8N127 324 aa15.44■□□□□ 0.06
USB1-213ENST00000566292 ST7LQ8TDW4 575 aa15.44■□□□□ 0.06
USB1-213ENST00000566292 OR52D1Q9H346 318 aa15.44■□□□□ 0.06
USB1-213ENST00000566292 C7orf69Q9H7B7 122 aa15.44■□□□□ 0.06
USB1-213ENST00000566292 PTTG3PQ9NZH4 202 aa15.44■□□□□ 0.06
USB1-213ENST00000566292 CD300AQ9UGN4 299 aa15.44■□□□□ 0.06
USB1-213ENST00000566292 IL19Q9UHD0 177 aa15.44■□□□□ 0.06
USB1-213ENST00000566292 B9D1Q9UPM9 204 aa15.44■□□□□ 0.06
USB1-213ENST00000566292 POLR1DQ9Y2S0 133 aa15.44■□□□□ 0.06
USB1-213ENST00000566292 J3QW42 95 aa15.43■□□□□ 0.06
USB1-213ENST00000566292 FSHBP01225 129 aa15.43■□□□□ 0.06
USB1-213ENST00000566292 HIST1H1CP16403 213 aaKnown RBP15.43■□□□□ 0.06
USB1-213ENST00000566292 GATA3P23771 443 aa15.43■□□□□ 0.06
USB1-213ENST00000566292 CENPAP49450 140 aa15.43■□□□□ 0.06
USB1-213ENST00000566292 RGS6P49758 472 aa15.43■□□□□ 0.06
USB1-213ENST00000566292 SMIM11AP58511 58 aa15.43■□□□□ 0.06
USB1-213ENST00000566292 RSPO1Q2MKA7 263 aaPredicted RBP15.43■□□□□ 0.06
USB1-213ENST00000566292 OR2T2Q6IF00 324 aa15.43■□□□□ 0.06
USB1-213ENST00000566292 LEG1Q6P5S2 330 aa15.43■□□□□ 0.06
USB1-213ENST00000566292 DNM1P34Q6PK57 102 aa15.43■□□□□ 0.06
USB1-213ENST00000566292 CORO6Q6QEF8 472 aa15.43■□□□□ 0.06
USB1-213ENST00000566292 FBXW12Q6X9E4 464 aa15.43■□□□□ 0.06
USB1-213ENST00000566292 OR6V1Q8N148 313 aa15.43■□□□□ 0.06
USB1-213ENST00000566292 GJC3Q8NFK1 279 aa15.43■□□□□ 0.06
USB1-213ENST00000566292 NANPQ8TBE9 248 aa15.43■□□□□ 0.06
USB1-213ENST00000566292 OR2V2Q96R30 315 aa15.43■□□□□ 0.06
USB1-213ENST00000566292 NMNAT3Q96T66 252 aa15.43■□□□□ 0.06
USB1-213ENST00000566292 COQ7Q99807 217 aa15.43■□□□□ 0.06
USB1-213ENST00000566292 SRA1Q9HD15 236 aaKnown RBP15.43■□□□□ 0.06
USB1-213ENST00000566292 MAGEL2Q9UJ55 1249 aa15.43■□□□□ 0.06
USB1-213ENST00000566292 DOCK11Q5JSL3 2073 aa15.43■□□□□ 0.06
USB1-213ENST00000566292 ARPC2O15144 300 aa15.42■□□□□ 0.06
USB1-213ENST00000566292 ARPC3O15145 178 aa15.42■□□□□ 0.06
USB1-213ENST00000566292 FOXH1O75593 365 aa15.42■□□□□ 0.06
USB1-213ENST00000566292 FPR3P25089 353 aa15.42■□□□□ 0.06
USB1-213ENST00000566292 SLC6A6P31641 620 aa15.42■□□□□ 0.06
USB1-213ENST00000566292 SEC61A1P61619 476 aaKnown RBP15.42■□□□□ 0.06
USB1-213ENST00000566292 COX10Q12887 443 aa15.42■□□□□ 0.06
USB1-213ENST00000566292 ZMYND11Q15326 602 aa15.42■□□□□ 0.06
USB1-213ENST00000566292 TMEM155Q4W5P6 130 aa15.42■□□□□ 0.06
USB1-213ENST00000566292 PGM2L1Q6PCE3 622 aa15.42■□□□□ 0.06
USB1-213ENST00000566292 LRRC28Q86X40 367 aaPredicted RBP15.42■□□□□ 0.06
USB1-213ENST00000566292 PGAM4Q8N0Y7 254 aa15.42■□□□□ 0.06
USB1-213ENST00000566292 SLC26A10Q8NG04 563 aa15.42■□□□□ 0.06
USB1-213ENST00000566292 OR4K13Q8NH42 304 aa15.42■□□□□ 0.06
USB1-213ENST00000566292 APOBEC3DQ96AK3 386 aaPredicted RBP15.42■□□□□ 0.06
USB1-213ENST00000566292 SLC6A7Q99884 636 aa15.42■□□□□ 0.06
USB1-213ENST00000566292 HDHD2Q9H0R4 259 aa15.42■□□□□ 0.06
USB1-213ENST00000566292 PATZ1Q9HBE1 687 aaKnown RBP15.42■□□□□ 0.06
USB1-213ENST00000566292 MMP26Q9NRE1 261 aa15.42■□□□□ 0.06
USB1-213ENST00000566292 PPP1R3CQ9UQK1 317 aa15.42■□□□□ 0.06
USB1-213ENST00000566292 PPIAL4EA0A075B759 164 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 PPIAL4CA0A0B4J2A2 164 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 PPIAL4DF5H284 164 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 SURF4O15260 269 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 ATP8B1O43520 1251 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 OR10H3O60404 316 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 PPIAL4FP0DN26 164 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 RRM2P31350 389 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 GSSP48637 474 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 MMP16P51512 607 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 BTG1P62324 171 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 KRTAP27-1Q3LI81 207 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 SLC18B1Q6NT16 456 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 C12orf54Q6X4T0 127 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 CFAP77Q6ZQR2 320 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 ZBTB46Q86UZ6 589 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 JAZF1Q86VZ6 243 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 SPICQ8N5J4 248 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 ATG16L2Q8NAA4 619 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 DEFB108BQ8NET1 73 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 OR8G5Q8NG78 346 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 OR10AD1Q8NGE0 317 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 OR5L1Q8NGL2 311 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 NSMCE2Q96MF7 247 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 CDRT15Q96T59 188 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 IFT27Q9BW83 186 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 NSRP1Q9H0G5 558 aaKnown RBP15.41■□□□□ 0.06
USB1-213ENST00000566292 FN3KQ9H479 309 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 GCM1Q9NP62 436 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 RPRD1BQ9NQG5 326 aaKnown RBP15.41■□□□□ 0.06
USB1-213ENST00000566292 ARL8BQ9NVJ2 186 aa15.41■□□□□ 0.06
USB1-213ENST00000566292 POLR3KQ9Y2Y1 108 aaPredicted RBP15.41■□□□□ 0.06
USB1-213ENST00000566292 F5H0A9 414 aaPredicted RBP15.4■□□□□ 0.06
USB1-213ENST00000566292 H0YL77 283 aa15.4■□□□□ 0.06
USB1-213ENST00000566292 TRAPPC2LH3BP13 241 aa15.4■□□□□ 0.06
USB1-213ENST00000566292 TMEM178BH3BS89 294 aa15.4■□□□□ 0.06
USB1-213ENST00000566292 MLNRO43193 412 aa15.4■□□□□ 0.06
USB1-213ENST00000566292 RENP00797 406 aa15.4■□□□□ 0.06
USB1-213ENST00000566292 FABP3P05413 133 aa15.4■□□□□ 0.06
USB1-213ENST00000566292 SLC6A9P48067 706 aa15.4■□□□□ 0.06
USB1-213ENST00000566292 SAMD4BQ5PRF9 694 aaKnown RBP15.4■□□□□ 0.06
USB1-213ENST00000566292 COLCA1Q6ZS62 124 aa15.4■□□□□ 0.06
USB1-213ENST00000566292 CPLX4Q7Z7G2 160 aa15.4■□□□□ 0.06
USB1-213ENST00000566292 LINC00346Q8IVM7 164 aa15.4■□□□□ 0.06
USB1-213ENST00000566292 KLHL36Q8N4N3 616 aa15.4■□□□□ 0.06
USB1-213ENST00000566292 SDR9C7Q8NEX9 313 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms