RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 RNF133Q8WVZ7 376 aa12.87□□□□□ -0.35
SPG7-213ENST00000566221 FCGR1BQ92637 280 aa12.87□□□□□ -0.35
SPG7-213ENST00000566221 ZNF75AQ96N20 296 aa12.87□□□□□ -0.35
SPG7-213ENST00000566221 SIGLEC11Q96RL6 698 aa12.87□□□□□ -0.35
SPG7-213ENST00000566221 COQ7Q99807 217 aa12.87□□□□□ -0.35
SPG7-213ENST00000566221 ATF6BQ99941 703 aa12.87□□□□□ -0.35
SPG7-213ENST00000566221 SLC24A3Q9HC58 644 aa12.87□□□□□ -0.35
SPG7-213ENST00000566221 PNRC2Q9NPJ4 139 aaKnown RBP12.87□□□□□ -0.35
SPG7-213ENST00000566221 DDX28Q9NUL7 540 aaKnown RBP12.87□□□□□ -0.35
SPG7-213ENST00000566221 NPAP1Q9NZP6 1156 aa12.87□□□□□ -0.35
SPG7-213ENST00000566221 EXOSC1Q9Y3B2 195 aaKnown RBP12.87□□□□□ -0.35
SPG7-213ENST00000566221 UTP20O75691 2785 aaKnown RBP12.87□□□□□ -0.35
SPG7-213ENST00000566221 M0R1B8 84 aa12.86□□□□□ -0.35
SPG7-213ENST00000566221 MYL12AP19105 171 aa12.86□□□□□ -0.35
SPG7-213ENST00000566221 TTKP33981 857 aa12.86□□□□□ -0.35
SPG7-213ENST00000566221 APLNRP35414 380 aa12.86□□□□□ -0.35
SPG7-213ENST00000566221 KIR2DL3P43628 341 aa12.86□□□□□ -0.35
SPG7-213ENST00000566221 ACTA2P62736 377 aa12.86□□□□□ -0.35
SPG7-213ENST00000566221 ACTG2P63267 376 aa12.86□□□□□ -0.35
SPG7-213ENST00000566221 ROM1Q03395 351 aa12.86□□□□□ -0.35
SPG7-213ENST00000566221 EGR3Q06889 387 aa12.86□□□□□ -0.35
SPG7-213ENST00000566221 ZNF322Q6U7Q0 402 aaPredicted RBP12.86□□□□□ -0.35
SPG7-213ENST00000566221 ZNF584Q8IVC4 421 aa12.86□□□□□ -0.35
SPG7-213ENST00000566221 DMRTC2Q8IXT2 367 aaPredicted RBP12.86□□□□□ -0.35
SPG7-213ENST00000566221 SPARTQ8N0X7 666 aa12.86□□□□□ -0.35
SPG7-213ENST00000566221 ACBD4Q8NC06 268 aa12.86□□□□□ -0.35
SPG7-213ENST00000566221 CPEB3Q8NE35 698 aaKnown RBP12.86□□□□□ -0.35
SPG7-213ENST00000566221 OR1F12Q8NHA8 337 aa12.86□□□□□ -0.35
SPG7-213ENST00000566221 AMELYQ99218 206 aa12.86□□□□□ -0.35
SPG7-213ENST00000566221 C1QTNF6Q9BXI9 259 aa12.86□□□□□ -0.35
SPG7-213ENST00000566221 TTTY10Q9BZA0 68 aa12.86□□□□□ -0.35
SPG7-213ENST00000566221 PAK1IP1Q9NWT1 392 aaPredicted RBP12.86□□□□□ -0.35
SPG7-213ENST00000566221 CHCHD3Q9NX63 227 aaKnown RBP12.86□□□□□ -0.35
SPG7-213ENST00000566221 ERVK13-1Q9NX77 482 aa12.86□□□□□ -0.35
SPG7-213ENST00000566221 NDUFA13Q9P0J0 144 aa12.86□□□□□ -0.35
SPG7-213ENST00000566221 ERVK-18Q9QC07 812 aa12.86□□□□□ -0.35
SPG7-213ENST00000566221 IKZF2Q9UKS7 526 aa12.86□□□□□ -0.35
SPG7-213ENST00000566221 IGHV1-18A0A0C4DH31 117 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 CASKO14936 926 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 CLDN1O95832 211 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 CELA3BP08861 270 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 H2BFMP0C1H6 154 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 CECR9P0C854 216 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 EPXP11678 715 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 CRYGSP22914 178 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 STOMP27105 288 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 APEX1P27695 318 aaKnown RBP12.85□□□□□ -0.35
SPG7-213ENST00000566221 OPRL1P41146 370 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 GDI2P50395 445 aaKnown RBP12.85□□□□□ -0.35
SPG7-213ENST00000566221 CDH15P55291 814 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 GRB2P62993 217 aaKnown RBP12.85□□□□□ -0.35
SPG7-213ENST00000566221 ZNF85Q03923 595 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 GALEQ14376 348 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 TAF13Q15543 124 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 TBCEQ15813 527 aaPredicted RBP12.85□□□□□ -0.35
SPG7-213ENST00000566221 TBC1D28Q2M2D7 210 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 DEGS2Q6QHC5 323 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 TMEM108Q6UXF1 575 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 MEX3BQ6ZN04 569 aaKnown RBP12.85□□□□□ -0.35
SPG7-213ENST00000566221 PLEKHG7Q6ZR37 379 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 SPATC1Q76KD6 591 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 SSX6Q7RTT6 188 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 KRT77Q7Z794 578 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 MYPOPQ86VE0 399 aaPredicted RBP12.85□□□□□ -0.35
SPG7-213ENST00000566221 ZNF679Q8IYX0 411 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 SLC30A7Q8NEW0 376 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 OR1J2Q8NGS2 313 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 FAM222BQ8WU58 562 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 SNX33Q8WV41 574 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 MS4A3Q96HJ5 214 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 OR8B4Q96RC9 309 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 MROQ9BYG7 248 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 CCDC90BQ9GZT6 254 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 NIPAL2Q9H841 368 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 CENPMQ9NSP4 180 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 CRIM1Q9NZV1 1036 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 ABCA4P78363 2273 aa12.85□□□□□ -0.35
SPG7-213ENST00000566221 PRR32B1ATL7 298 aa12.84□□□□□ -0.35
SPG7-213ENST00000566221 ZNF254O75437 659 aa12.84□□□□□ -0.35
SPG7-213ENST00000566221 TFAP2AP05549 437 aa12.84□□□□□ -0.35
SPG7-213ENST00000566221 KRT8P05787 483 aa12.84□□□□□ -0.35
SPG7-213ENST00000566221 HTR1AP08908 422 aa12.84□□□□□ -0.35
SPG7-213ENST00000566221 ATP6V1B1P15313 513 aa12.84□□□□□ -0.35
SPG7-213ENST00000566221 PTAFRP25105 342 aa12.84□□□□□ -0.35
SPG7-213ENST00000566221 HSD11B1P28845 292 aa12.84□□□□□ -0.35
SPG7-213ENST00000566221 RIDAP52758 137 aaKnown RBP12.84□□□□□ -0.35
SPG7-213ENST00000566221 IRF3Q14653 427 aa12.84□□□□□ -0.35
SPG7-213ENST00000566221 CDONQ4KMG0 1287 aa12.84□□□□□ -0.35
SPG7-213ENST00000566221 LRRN1Q6UXK5 716 aa12.84□□□□□ -0.35
SPG7-213ENST00000566221 KCTD8Q6ZWB6 473 aa12.84□□□□□ -0.35
SPG7-213ENST00000566221 FAM220AQ7Z4H9 259 aa12.84□□□□□ -0.35
SPG7-213ENST00000566221 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.84□□□□□ -0.35
SPG7-213ENST00000566221 IL17RDQ8NFM7 739 aa12.84□□□□□ -0.35
SPG7-213ENST00000566221 SPTSSAQ969W0 71 aa12.84□□□□□ -0.35
SPG7-213ENST00000566221 POM121L2Q96KW2 1035 aa12.84□□□□□ -0.35
SPG7-213ENST00000566221 SPOCK3Q9BQ16 436 aa12.84□□□□□ -0.35
SPG7-213ENST00000566221 KCNS3Q9BQ31 491 aa12.84□□□□□ -0.35
SPG7-213ENST00000566221 ALG8Q9BVK2 526 aa12.84□□□□□ -0.35
SPG7-213ENST00000566221 ESRP2Q9H6T0 727 aaKnown RBP12.84□□□□□ -0.35
SPG7-213ENST00000566221 CDH20Q9HBT6 801 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms