RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 ZNF682O95780 498 aa10.67□□□□□ -0.7
RNF40-208ENST00000565995 GPANK1O95872 356 aa10.67□□□□□ -0.7
RNF40-208ENST00000565995 OPN1SWP03999 348 aa10.67□□□□□ -0.7
RNF40-208ENST00000565995 F13BP05160 661 aa10.67□□□□□ -0.7
RNF40-208ENST00000565995 COX5BP10606 129 aa10.67□□□□□ -0.7
RNF40-208ENST00000565995 ATP6V1B2P21281 511 aa10.67□□□□□ -0.7
RNF40-208ENST00000565995 TNFSF4P23510 183 aa10.67□□□□□ -0.7
RNF40-208ENST00000565995 ERFP50548 548 aa10.67□□□□□ -0.7
RNF40-208ENST00000565995 DAP3P51398 398 aaKnown RBP10.67□□□□□ -0.7
RNF40-208ENST00000565995 ARHGDIAP52565 204 aa10.67□□□□□ -0.7
RNF40-208ENST00000565995 RAG2P55895 527 aa10.67□□□□□ -0.7
RNF40-208ENST00000565995 KRTAP10-3P60369 221 aa10.67□□□□□ -0.7
RNF40-208ENST00000565995 DEFB112Q30KQ8 113 aa10.67□□□□□ -0.7
RNF40-208ENST00000565995 PGM2L1Q6PCE3 622 aa10.67□□□□□ -0.7
RNF40-208ENST00000565995 BTNL3Q6UXE8 466 aa10.67□□□□□ -0.7
RNF40-208ENST00000565995 NANOGNBQ7Z5D8 188 aa10.67□□□□□ -0.7
RNF40-208ENST00000565995 PATL1Q86TB9 770 aaKnown RBP10.67□□□□□ -0.7
RNF40-208ENST00000565995 SPATA24Q86W54 205 aa10.67□□□□□ -0.7
RNF40-208ENST00000565995 SMYD1Q8NB12 490 aa10.67□□□□□ -0.7
RNF40-208ENST00000565995 OR4D11Q8NGI4 311 aa10.67□□□□□ -0.7
RNF40-208ENST00000565995 VANGL1Q8TAA9 524 aaPredicted RBP10.67□□□□□ -0.7
RNF40-208ENST00000565995 RSRC1Q96IZ7 334 aaKnown RBP10.67□□□□□ -0.7
RNF40-208ENST00000565995 RBM4BQ9BQ04 359 aaKnown RBP10.67□□□□□ -0.7
RNF40-208ENST00000565995 WACQ9BTA9 647 aa10.67□□□□□ -0.7
RNF40-208ENST00000565995 TMEM165Q9HC07 324 aa10.67□□□□□ -0.7
RNF40-208ENST00000565995 GCM1Q9NP62 436 aa10.67□□□□□ -0.7
RNF40-208ENST00000565995 MIOXQ9UGB7 285 aa10.67□□□□□ -0.7
RNF40-208ENST00000565995 SLC7A7Q9UM01 511 aa10.67□□□□□ -0.7
RNF40-208ENST00000565995 TIMM10BQ9Y5J6 103 aa10.67□□□□□ -0.7
RNF40-208ENST00000565995 CPSF4LA6NMK7 179 aaKnown RBP10.66□□□□□ -0.7
RNF40-208ENST00000565995 SURF4O15260 269 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 CLPXO76031 633 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 SERPINA1P01009 418 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 IFNA14P01570 189 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 MT-ND1P03886 318 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 NR2C1P13056 603 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 SELEP16581 610 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 FUT1P19526 365 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 RBMXP38159 391 aaKnown RBP10.66□□□□□ -0.7
RNF40-208ENST00000565995 PCBD1P61457 104 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 ERVK-25P63136 954 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 HLXQ14774 488 aaPredicted RBP10.66□□□□□ -0.7
RNF40-208ENST00000565995 TAF11Q15544 211 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 SGCAQ16586 387 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 HIST2H2BDQ6DRA6 164 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 ARL9Q6T311 187 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 JAZF1Q86VZ6 243 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 RBM45Q8IUH3 476 aaKnown RBP10.66□□□□□ -0.7
RNF40-208ENST00000565995 NPEPL1Q8NDH3 523 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 OR2Z1Q8NG97 314 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 OR10S1Q8NGN2 331 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 FNDC8Q8TC99 324 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 HDAC2Q92769 488 aaKnown RBP10.66□□□□□ -0.7
RNF40-208ENST00000565995 HAVCR1Q96D42 359 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 FAM71F1Q96KD3 344 aaPredicted RBP10.66□□□□□ -0.7
RNF40-208ENST00000565995 PKP2Q99959 881 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 TXNIPQ9H3M7 391 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 INIPQ9NRY2 104 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 ACTR3BQ9P1U1 418 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 POMT1Q9Y6A1 747 aa10.66□□□□□ -0.7
RNF40-208ENST00000565995 IGHV3OR16-10A0A075B7F0 116 aa10.65□□□□□ -0.7
RNF40-208ENST00000565995 TRAV40A0A0B4J280 105 aa10.65□□□□□ -0.7
RNF40-208ENST00000565995 MDFIC2A0A1B0GVS7 189 aa10.65□□□□□ -0.7
RNF40-208ENST00000565995 MCIDASD6RGH6 385 aa10.65□□□□□ -0.7
RNF40-208ENST00000565995 M0QX08 132 aa10.65□□□□□ -0.7
RNF40-208ENST00000565995 TIMM8AO60220 97 aaPredicted RBP10.65□□□□□ -0.7
RNF40-208ENST00000565995 CRYBA1P05813 215 aa10.65□□□□□ -0.7
RNF40-208ENST00000565995 UMPSP11172 480 aa10.65□□□□□ -0.7
RNF40-208ENST00000565995 CD247P20963 164 aa10.65□□□□□ -0.7
RNF40-208ENST00000565995 GSTM3P21266 225 aa10.65□□□□□ -0.7
RNF40-208ENST00000565995 LAP3P28838 519 aa10.65□□□□□ -0.7
RNF40-208ENST00000565995 RBM34P42696 430 aaKnown RBP10.65□□□□□ -0.7
RNF40-208ENST00000565995 MS4A2Q01362 244 aa10.65□□□□□ -0.7
RNF40-208ENST00000565995 TRAP1Q12931 704 aaKnown RBP10.65□□□□□ -0.7
RNF40-208ENST00000565995 ZNF181Q2M3W8 571 aa10.65□□□□□ -0.7
RNF40-208ENST00000565995 CYBRD1Q53TN4 286 aa10.65□□□□□ -0.7
RNF40-208ENST00000565995 LCN8Q6JVE9 175 aa10.65□□□□□ -0.7
RNF40-208ENST00000565995 BRICD5Q6PL45 260 aa10.65□□□□□ -0.7
RNF40-208ENST00000565995 FIP1L1Q6UN15 594 aaKnown RBP10.65□□□□□ -0.7
RNF40-208ENST00000565995 KLBQ86Z14 1044 aa10.65□□□□□ -0.7
RNF40-208ENST00000565995 ITLN1Q8WWA0 313 aa10.65□□□□□ -0.7
RNF40-208ENST00000565995 PTP4A1Q93096 173 aa10.65□□□□□ -0.7
RNF40-208ENST00000565995 TPD52L3Q96J77 140 aa10.65□□□□□ -0.7
RNF40-208ENST00000565995 OR2V2Q96R30 315 aa10.65□□□□□ -0.7
RNF40-208ENST00000565995 ALG12Q9BV10 488 aa10.65□□□□□ -0.7
RNF40-208ENST00000565995 CHIAQ9BZP6 476 aa10.65□□□□□ -0.7
RNF40-208ENST00000565995 RPS6KA6Q9UK32 745 aa10.65□□□□□ -0.7
RNF40-208ENST00000565995 NDRG4Q9ULP0 352 aaKnown RBP10.65□□□□□ -0.7
RNF40-208ENST00000565995 SAMD4AQ9UPU9 718 aaKnown RBP10.65□□□□□ -0.7
RNF40-208ENST00000565995 COL7A1Q02388 2944 aa10.64□□□□□ -0.71
RNF40-208ENST00000565995 KPNA4O00629 521 aaPredicted RBP10.64□□□□□ -0.71
RNF40-208ENST00000565995 TNFRSF13BO14836 293 aaPredicted RBP10.64□□□□□ -0.71
RNF40-208ENST00000565995 OR7A10O76100 309 aa10.64□□□□□ -0.71
RNF40-208ENST00000565995 KDELR2P33947 212 aa10.64□□□□□ -0.71
RNF40-208ENST00000565995 AQP2P41181 271 aa10.64□□□□□ -0.71
RNF40-208ENST00000565995 MMP16P51512 607 aa10.64□□□□□ -0.71
RNF40-208ENST00000565995 GNB2P62879 340 aa10.64□□□□□ -0.71
RNF40-208ENST00000565995 FMODQ06828 376 aa10.64□□□□□ -0.71
RNF40-208ENST00000565995 ENDOGQ14249 297 aaKnown RBP10.64□□□□□ -0.71
RNF40-208ENST00000565995 KPNB1Q14974 876 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms