RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 RSPO1Q2MKA7 263 aaPredicted RBP13.22□□□□□ -0.29
CDH3-204ENST00000565453 SPATS1Q496A3 300 aa13.22□□□□□ -0.29
CDH3-204ENST00000565453 PGBD2Q6P3X8 592 aa13.22□□□□□ -0.29
CDH3-204ENST00000565453 FBXW12Q6X9E4 464 aa13.22□□□□□ -0.29
CDH3-204ENST00000565453 ZBTB46Q86UZ6 589 aa13.22□□□□□ -0.29
CDH3-204ENST00000565453 DEFB107AQ8IZN7 70 aa13.22□□□□□ -0.29
CDH3-204ENST00000565453 GJC3Q8NFK1 279 aa13.22□□□□□ -0.29
CDH3-204ENST00000565453 OR2Z1Q8NG97 314 aa13.22□□□□□ -0.29
CDH3-204ENST00000565453 OR4K13Q8NH42 304 aa13.22□□□□□ -0.29
CDH3-204ENST00000565453 ITLN1Q8WWA0 313 aa13.22□□□□□ -0.29
CDH3-204ENST00000565453 MCUR1Q96AQ8 359 aa13.22□□□□□ -0.29
CDH3-204ENST00000565453 SIGLEC11Q96RL6 698 aa13.22□□□□□ -0.29
CDH3-204ENST00000565453 HDHD2Q9H0R4 259 aa13.22□□□□□ -0.29
CDH3-204ENST00000565453 SRA1Q9HD15 236 aaKnown RBP13.22□□□□□ -0.29
CDH3-204ENST00000565453 TMEM106BQ9NUM4 274 aa13.22□□□□□ -0.29
CDH3-204ENST00000565453 IL19Q9UHD0 177 aa13.22□□□□□ -0.29
CDH3-204ENST00000565453 A0A0G2JMP0 313 aa13.21□□□□□ -0.29
CDH3-204ENST00000565453 A0A0X1KG70 313 aa13.21□□□□□ -0.29
CDH3-204ENST00000565453 ISPDA4D126 451 aa13.21□□□□□ -0.29
CDH3-204ENST00000565453 J3QLI3 93 aa13.21□□□□□ -0.29
CDH3-204ENST00000565453 RENP00797 406 aa13.21□□□□□ -0.29
CDH3-204ENST00000565453 TNFSF4P23510 183 aa13.21□□□□□ -0.29
CDH3-204ENST00000565453 TSPAN31Q12999 210 aa13.21□□□□□ -0.29
CDH3-204ENST00000565453 HLXQ14774 488 aaPredicted RBP13.21□□□□□ -0.29
CDH3-204ENST00000565453 SLC18B1Q6NT16 456 aa13.21□□□□□ -0.29
CDH3-204ENST00000565453 SHQ1Q6PI26 577 aaKnown RBP13.21□□□□□ -0.29
CDH3-204ENST00000565453 CORO6Q6QEF8 472 aa13.21□□□□□ -0.29
CDH3-204ENST00000565453 C16orf89Q6UX73 402 aa13.21□□□□□ -0.29
CDH3-204ENST00000565453 ZNF620Q6ZNG0 422 aa13.21□□□□□ -0.29
CDH3-204ENST00000565453 COLCA1Q6ZS62 124 aa13.21□□□□□ -0.29
CDH3-204ENST00000565453 ZNF771Q7L3S4 317 aaPredicted RBP13.21□□□□□ -0.29
CDH3-204ENST00000565453 C1QL2Q7Z5L3 287 aa13.21□□□□□ -0.29
CDH3-204ENST00000565453 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.21□□□□□ -0.29
CDH3-204ENST00000565453 JAZF1Q86VZ6 243 aa13.21□□□□□ -0.29
CDH3-204ENST00000565453 ZDHHC21Q8IVQ6 265 aa13.21□□□□□ -0.29
CDH3-204ENST00000565453 OR4M2Q8NGB6 313 aa13.21□□□□□ -0.29
CDH3-204ENST00000565453 GNPDA2Q8TDQ7 276 aa13.21□□□□□ -0.29
CDH3-204ENST00000565453 APOBEC3DQ96AK3 386 aaPredicted RBP13.21□□□□□ -0.29
CDH3-204ENST00000565453 IFT27Q9BW83 186 aa13.21□□□□□ -0.29
CDH3-204ENST00000565453 OCEL1Q9H607 264 aa13.21□□□□□ -0.29
CDH3-204ENST00000565453 PTTG3PQ9NZH4 202 aa13.21□□□□□ -0.29
CDH3-204ENST00000565453 OPN4Q9UHM6 478 aa13.21□□□□□ -0.29
CDH3-204ENST00000565453 POLR1DQ9Y2S0 133 aa13.21□□□□□ -0.29
CDH3-204ENST00000565453 ANK2Q01484 3957 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 OR6C68A6NDL8 312 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 IDH3BO43837 385 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 DCTN3O75935 186 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 TNFRSF1AP19438 455 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 ATP6V1B2P21281 511 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 EPHA1P21709 976 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 ZFP36P26651 326 aaKnown RBP13.2□□□□□ -0.3
CDH3-204ENST00000565453 IFNGR2P38484 337 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 CENPAP49450 140 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 HMGA2P52926 109 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 TMEM155Q4W5P6 130 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 DCAF12L2Q5VW00 463 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 OR2T2Q6IF00 324 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 CFAP77Q6ZQR2 320 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 PEG10Q86TG7 708 aaKnown RBP13.2□□□□□ -0.3
CDH3-204ENST00000565453 OR5AS1Q8N127 324 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 TEX29Q8N6K0 151 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.2□□□□□ -0.3
CDH3-204ENST00000565453 SDR9C7Q8NEX9 313 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 OR2V2Q96R30 315 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 DDOQ99489 341 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 FN3KQ9H479 309 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 PNRC2Q9NPJ4 139 aaKnown RBP13.2□□□□□ -0.3
CDH3-204ENST00000565453 RPRD1BQ9NQG5 326 aaKnown RBP13.2□□□□□ -0.3
CDH3-204ENST00000565453 NDE1Q9NXR1 346 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 UBAP1Q9NZ09 502 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 TMCC3Q9ULS5 477 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 LYVE1Q9Y5Y7 322 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 DYSFO75923 2080 aa13.2□□□□□ -0.3
CDH3-204ENST00000565453 PPIAL4EA0A075B759 164 aa13.19□□□□□ -0.3
CDH3-204ENST00000565453 PPIAL4CA0A0B4J2A2 164 aa13.19□□□□□ -0.3
CDH3-204ENST00000565453 A0A1B0GWJ7 208 aa13.19□□□□□ -0.3
CDH3-204ENST00000565453 PPIAL4DF5H284 164 aa13.19□□□□□ -0.3
CDH3-204ENST00000565453 SURF4O15260 269 aa13.19□□□□□ -0.3
CDH3-204ENST00000565453 FSHBP01225 129 aa13.19□□□□□ -0.3
CDH3-204ENST00000565453 SBK2P0C263 348 aa13.19□□□□□ -0.3
CDH3-204ENST00000565453 PPIAL4FP0DN26 164 aa13.19□□□□□ -0.3
CDH3-204ENST00000565453 GATA3P23771 443 aa13.19□□□□□ -0.3
CDH3-204ENST00000565453 GGT2P36268 569 aa13.19□□□□□ -0.3
CDH3-204ENST00000565453 MAGEA2P43356 314 aa13.19□□□□□ -0.3
CDH3-204ENST00000565453 LCN2P80188 198 aa13.19□□□□□ -0.3
CDH3-204ENST00000565453 SCGB2A2Q13296 93 aa13.19□□□□□ -0.3
CDH3-204ENST00000565453 ZMYND11Q15326 602 aa13.19□□□□□ -0.3
CDH3-204ENST00000565453 LRRC28Q86X40 367 aaPredicted RBP13.19□□□□□ -0.3
CDH3-204ENST00000565453 LINC00346Q8IVM7 164 aa13.19□□□□□ -0.3
CDH3-204ENST00000565453 OR8G5Q8NG78 346 aa13.19□□□□□ -0.3
CDH3-204ENST00000565453 OR5L1Q8NGL2 311 aa13.19□□□□□ -0.3
CDH3-204ENST00000565453 OR4C15Q8NGM1 316 aa13.19□□□□□ -0.3
CDH3-204ENST00000565453 ZFAND2BQ8WV99 257 aa13.19□□□□□ -0.3
CDH3-204ENST00000565453 BTBD10Q9BSF8 475 aa13.19□□□□□ -0.3
CDH3-204ENST00000565453 C1QTNF5Q9BXJ0 243 aa13.19□□□□□ -0.3
CDH3-204ENST00000565453 EGLN3Q9H6Z9 239 aa13.19□□□□□ -0.3
CDH3-204ENST00000565453 PATZ1Q9HBE1 687 aaKnown RBP13.19□□□□□ -0.3
CDH3-204ENST00000565453 MRPL22Q9NWU5 206 aaKnown RBP13.19□□□□□ -0.3
CDH3-204ENST00000565453 ACTR3BQ9P1U1 418 aa13.19□□□□□ -0.3
CDH3-204ENST00000565453 CYB5R1Q9UHQ9 305 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms