RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, human

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB40C-208	ENST00000564703	EFNB1	P98172	346 aa		13.76	□□□□□ -0.21
RAB40C-208	ENST00000564703	PCK2	Q16822	640 aa		13.76	□□□□□ -0.21
RAB40C-208	ENST00000564703	SWI5	Q1ZZU3	235 aa		13.76	□□□□□ -0.21
RAB40C-208	ENST00000564703	LPCAT4	Q643R3	524 aa		13.76	□□□□□ -0.21
RAB40C-208	ENST00000564703	DPY19L4	Q7Z388	723 aa		13.76	□□□□□ -0.21
RAB40C-208	ENST00000564703	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	13.76	□□□□□ -0.21
RAB40C-208	ENST00000564703	ZNF454	Q8N9F8	522 aa		13.76	□□□□□ -0.21
RAB40C-208	ENST00000564703	FAM81A	Q8TBF8	368 aa		13.76	□□□□□ -0.21
RAB40C-208	ENST00000564703	THEM6	Q8WUY1	208 aa		13.76	□□□□□ -0.21
RAB40C-208	ENST00000564703	SLC7A6	Q92536	515 aa		13.76	□□□□□ -0.21
RAB40C-208	ENST00000564703	RFK	Q969G6	155 aa		13.76	□□□□□ -0.21
RAB40C-208	ENST00000564703	SLAMF6	Q96DU3	332 aa		13.76	□□□□□ -0.21
RAB40C-208	ENST00000564703	RDH12	Q96NR8	316 aa		13.76	□□□□□ -0.21
RAB40C-208	ENST00000564703	COPS4	Q9BT78	406 aa		13.76	□□□□□ -0.21
RAB40C-208	ENST00000564703	GSX2	Q9BZM3	304 aa		13.76	□□□□□ -0.21
RAB40C-208	ENST00000564703	VCX	Q9H320	206 aa		13.76	□□□□□ -0.21
RAB40C-208	ENST00000564703	MARCH7	Q9H992	704 aa		13.76	□□□□□ -0.21
RAB40C-208	ENST00000564703	DYNLRB1	Q9NP97	96 aa		13.76	□□□□□ -0.21
RAB40C-208	ENST00000564703	ZNF701	Q9NV72	531 aa	Predicted RBP	13.76	□□□□□ -0.21
RAB40C-208	ENST00000564703		A0A1W2PPW3	197 aa		13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	SNTN	A6NMZ2	147 aa		13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703		M0R129	80 aa		13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	NGF	P01138	241 aa		13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	MT-ND5	P03915	603 aa		13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	SLC2A5	P22732	501 aa		13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	ATP6V1E1	P36543	226 aa		13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	WNT5A	P41221	380 aa		13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	KLF3	P57682	345 aa	Predicted RBP	13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	MST1L	Q2TV78	715 aa		13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	SHE	Q5VZ18	495 aa		13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	SLC16A9	Q7RTY1	509 aa		13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	TIGD4	Q8IY51	512 aa		13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	ZNF101	Q8IZC7	436 aa		13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	PACRGL	Q8N7B6	248 aa		13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	IGFBPL1	Q8WX77	278 aa		13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	APOBEC3D	Q96AK3	386 aa	Predicted RBP	13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	MAP6	Q96JE9	813 aa		13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	DOK1	Q99704	481 aa		13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	SYT3	Q9BQG1	590 aa		13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	MRPL37	Q9BZE1	423 aa	Known RBP	13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	YIPF3	Q9GZM5	350 aa		13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	MS4A5	Q9H3V2	200 aa		13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	BARX1	Q9HBU1	254 aa	Predicted RBP	13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	SMPD3	Q9NY59	655 aa	Predicted RBP	13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	SLCO1C1	Q9NYB5	712 aa		13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	FZR1	Q9UM11	496 aa		13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	TMEM14A	Q9Y6G1	99 aa		13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	USF3	Q68DE3	2245 aa		13.75	□□□□□ -0.21
RAB40C-208	ENST00000564703	LOC100130705	A0A1B0GUX0	176 aa		13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	ZNF878	C9JN71	531 aa		13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	MPZL2	O60487	215 aa		13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	ICMT	O60725	284 aa		13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	APOC1	P02654	83 aa		13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	LYN	P07948	512 aa		13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	DBH	P09172	617 aa		13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	ZNF250	P15622	560 aa		13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	PAX1	P15863	534 aa		13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	HSD11B1	P28845	292 aa		13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	NAA10	P41227	235 aa	Predicted RBP	13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	SLC6A9	P48067	706 aa		13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	GRB2	P62993	217 aa	Known RBP	13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	SLC34A1	Q06495	639 aa		13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	SPATA46	Q5T0L3	261 aa		13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	AADACL4	Q5VUY2	407 aa		13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	C11orf71	Q6IPW1	123 aa		13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	RHOU	Q7L0Q8	258 aa		13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	BCDIN3D	Q7Z5W3	292 aa	Known RBP	13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	SLC25A40	Q8TBP6	338 aa		13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	ABHD6	Q9BV23	337 aa		13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	RAB1B	Q9H0U4	201 aa		13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	FAM118A	Q9NWS6	357 aa		13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	WARS2	Q9UGM6	360 aa	Known RBP	13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	LAMP5	Q9UJQ1	280 aa		13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	STARD10	Q9Y365	291 aa		13.74	□□□□□ -0.21
RAB40C-208	ENST00000564703	PDZD2	O15018	2839 aa		13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703	TMEM129	A0AVI4	362 aa		13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703		H7C417	338 aa		13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703		J3QW42	95 aa		13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703	SELENOF	O60613	162 aa		13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703	LCAT	P04180	440 aa		13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703	H2BFM	P0C1H6	154 aa		13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703	ERVS71-1	P61550	626 aa		13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703	MALL	Q13021	153 aa		13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703	NKPD1	Q17RQ9	610 aa		13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703	MEDAG	Q5VYS4	303 aa		13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703	KCTD18	Q6PI47	426 aa	Predicted RBP	13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703	SPATC1	Q76KD6	591 aa		13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703	ZNF283	Q8N7M2	679 aa		13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703	OTOS	Q8NHW6	89 aa		13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703	SNX33	Q8WV41	574 aa		13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703	MARS2	Q96GW9	593 aa	Known RBP	13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703		Q96MT0	163 aa		13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703	MBOAT4	Q96T53	435 aa		13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703	CNN2	Q99439	309 aa	Known RBP	13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703	KCNJ15	Q99712	375 aa		13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703	APOL4	Q9BPW4	351 aa		13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703	OR2J1	Q9GZK6	312 aa		13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703	SP140L	Q9H930	580 aa		13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703	PNRC2	Q9NPJ4	139 aa	Known RBP	13.73	□□□□□ -0.21
RAB40C-208	ENST00000564703	DDX28	Q9NUL7	540 aa	Known RBP	13.73	□□□□□ -0.21

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