RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 SLIT2O94813 1529 aa3.06□□□□□ -1.92
LINC00560-201ENST00000564593 C10orf71Q711Q0 1435 aa3.06□□□□□ -1.92
LINC00560-201ENST00000564593 MYH4Q9Y623 1939 aa3.06□□□□□ -1.92
LINC00560-201ENST00000564593 CNTNAP1P78357 1384 aa3.06□□□□□ -1.92
LINC00560-201ENST00000564593 ROBO3Q96MS0 1386 aa3.06□□□□□ -1.92
LINC00560-201ENST00000564593 ATAD5Q96QE3 1844 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 NFASCO94856 1347 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 A0A0B4J2A0 478 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 LRRIQ3A6PVS8 624 aaPredicted RBP3.05□□□□□ -1.92
LINC00560-201ENST00000564593 C9JVG2 144 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 RAB29O14966 203 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 CLOCKO15516 846 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 CLIC3O95833 236 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 AGTP01019 485 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 ANXA5P08758 320 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 SMIM10L1P0DMW3 83 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 SERPINB5P36952 375 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 ACTA2P62736 377 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 ACTG2P63267 376 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 ACTC1P68032 377 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 ACTA1P68133 377 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 TGM3Q08188 693 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 CUL2Q13617 745 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 WHAMMP3Q1A5X7 153 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 VAX1Q5SQQ9 334 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 LRRC66Q68CR7 880 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 METAP1DQ6UB28 335 aaPredicted RBP3.05□□□□□ -1.92
LINC00560-201ENST00000564593 Q6ZSR3 168 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 TMEM179Q6ZVK1 233 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 MREGQ8N565 214 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 ACTRT1Q8TDG2 376 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 IL22RA2Q969J5 263 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 LRRC58Q96CX6 371 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 SMIM10Q96HG1 83 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 ZNF578Q96N58 590 aaPredicted RBP3.05□□□□□ -1.92
LINC00560-201ENST00000564593 CDC42EP4Q9H3Q1 356 aaKnown RBP3.05□□□□□ -1.92
LINC00560-201ENST00000564593 ANKRA2Q9H9E1 313 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 FGF20Q9NP95 211 aaPredicted RBP3.05□□□□□ -1.92
LINC00560-201ENST00000564593 SAMSN1Q9NSI8 373 aaKnown RBP3.05□□□□□ -1.92
LINC00560-201ENST00000564593 SHPKQ9UHJ6 478 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 PITPNC1Q9UKF7 332 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 WSB1Q9Y6I7 421 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 DDX60LQ5H9U9 1706 aaKnown RBP3.05□□□□□ -1.92
LINC00560-201ENST00000564593 ABCB11O95342 1321 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 LRRC37AA6NMS7 1700 aa3.05□□□□□ -1.92
LINC00560-201ENST00000564593 CIB4A0PJX0 185 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 SMCO2A6NFE2 343 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 F6UB75 175 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 SGK1O00141 431 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 CDC7O00311 574 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 AIM2O14862 343 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 DFNA5O60443 496 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 SS18L1O75177 396 aaPredicted RBP3.04□□□□□ -1.92
LINC00560-201ENST00000564593 EEDO75530 441 aaKnown RBP3.04□□□□□ -1.92
LINC00560-201ENST00000564593 OR2J3O76001 311 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 TSPAN13O95857 204 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 FTH1P02794 183 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 BGLAPP02818 100 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 ADRB3P13945 408 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 ZNF30P17039 623 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 AZU1P20160 251 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 HOXA9P31269 272 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 NAA10P41227 235 aaPredicted RBP3.04□□□□□ -1.92
LINC00560-201ENST00000564593 CXCL5P42830 114 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 TMED10P49755 219 aaKnown RBP3.04□□□□□ -1.92
LINC00560-201ENST00000564593 SSR4P51571 173 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 GNG11P61952 73 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 MECOMQ03112 1051 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 PNOCQ13519 176 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 PRPSAP1Q14558 356 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 ANKRD26P1Q6NSI1 321 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 GTPBP8Q8N3Z3 284 aaPredicted RBP3.04□□□□□ -1.92
LINC00560-201ENST00000564593 DUSP18Q8NEJ0 188 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 SLC7A13Q8TCU3 470 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 ACMSDQ8TDX5 336 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 ZNF75CPQ92670 426 aaPredicted RBP3.04□□□□□ -1.92
LINC00560-201ENST00000564593 SLC38A4Q969I6 547 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 PIK3IP1Q96FE7 263 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 TSSK3Q96PN8 268 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 ALS2CR12Q96Q35 445 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 P2RX4Q99571 388 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 SLC29A1Q99808 456 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 FAM107BQ9H098 131 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 RPF2Q9H7B2 306 aaKnown RBP3.04□□□□□ -1.92
LINC00560-201ENST00000564593 NEK6Q9HC98 313 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 C6orf50Q9HD87 102 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 RWDD2AQ9UIY3 292 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 ING4Q9UNL4 249 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 ARFGEF1Q9Y6D6 1849 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 LTBP4Q8N2S1 1624 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 QSER1Q2KHR3 1735 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 MYO3BQ8WXR4 1341 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 BAZ2BQ9UIF8 2168 aaKnown RBP3.04□□□□□ -1.92
LINC00560-201ENST00000564593 SLX4Q8IY92 1834 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 OR2AG2A6NM03 316 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 HIDE1A8MVS5 230 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 TMX2-CTNND1H3BSU7 103 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 KMOO15229 486 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 C6orf47O95873 294 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 IGLV2-23P01705 113 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms