RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 OR8B4Q96RC9 309 aa14.78□□□□□ -0.04
CMTM3-208ENST00000564247 SIGLEC11Q96RL6 698 aa14.78□□□□□ -0.04
CMTM3-208ENST00000564247 MRPS26Q9BYN8 205 aaKnown RBP14.78□□□□□ -0.04
CMTM3-208ENST00000564247 OR2H1Q9GZK4 316 aa14.78□□□□□ -0.04
CMTM3-208ENST00000564247 MOV10Q9HCE1 1003 aaKnown RBP14.78□□□□□ -0.04
CMTM3-208ENST00000564247 CLEC2DQ9UHP7 191 aa14.78□□□□□ -0.04
CMTM3-208ENST00000564247 SCOCQ9UIL1 159 aa14.78□□□□□ -0.04
CMTM3-208ENST00000564247 FBXL3Q9UKT7 428 aa14.78□□□□□ -0.04
CMTM3-208ENST00000564247 KLHDC2Q9Y2U9 406 aa14.78□□□□□ -0.04
CMTM3-208ENST00000564247 POLQO75417 2590 aa14.78□□□□□ -0.04
CMTM3-208ENST00000564247 IQCMA0A1B0GVH7 501 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 ZNF878C9JN71 531 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 J3QLW9 94 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 PSKH1P11801 424 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 ATP6V1B1P15313 513 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 ZNF19P17023 458 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 UGT2B10P36537 528 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 MAP2K4P45985 399 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 RIDAP52758 137 aaKnown RBP14.77□□□□□ -0.05
CMTM3-208ENST00000564247 KRTAP10-9P60411 292 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 TUBA1BP68363 451 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 SORDQ00796 357 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 PSG4Q00888 419 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 ROM1Q03395 351 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 EMX1Q04741 257 aaPredicted RBP14.77□□□□□ -0.05
CMTM3-208ENST00000564247 RAB35Q15286 201 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 CDONQ4KMG0 1287 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 CCDC92Q53HC0 331 aaPredicted RBP14.77□□□□□ -0.05
CMTM3-208ENST00000564247 CFAP77Q6ZQR2 320 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 KCTD8Q6ZWB6 473 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 TUBA1AQ71U36 451 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 SSX6Q7RTT6 188 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 SYS1Q8N2H4 156 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 YIPF7Q8N8F6 280 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 OR52N1Q8NH53 320 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 FGFBP3Q8TAT2 258 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 RNF133Q8WVZ7 376 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 HSD17B8Q92506 261 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 S100PBPQ96BU1 408 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 ZNF649Q9BS31 505 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 TTTY10Q9BZA0 68 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 ACTR6Q9GZN1 396 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 HDHD2Q9H0R4 259 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 ELOVL3Q9HB03 270 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 B3GNT2Q9NY97 397 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 SLCO1C1Q9NYB5 712 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 GNG8Q9UK08 70 aa14.77□□□□□ -0.05
CMTM3-208ENST00000564247 OTOGQ6ZRI0 2925 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 ANKRD17O75179 2603 aaKnown RBP14.76□□□□□ -0.05
CMTM3-208ENST00000564247 PSMD9O00233 223 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 DOK2O60496 412 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 CLPTM1O96005 669 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 APOC1P02654 83 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 ADRA2AP08913 450 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 PPP3CBP16298 524 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 HSD11B1P28845 292 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 GBX2P52951 348 aaPredicted RBP14.76□□□□□ -0.05
CMTM3-208ENST00000564247 WNT4P56705 351 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 GRB2P62993 217 aaKnown RBP14.76□□□□□ -0.05
CMTM3-208ENST00000564247 MRPL28Q13084 256 aaKnown RBP14.76□□□□□ -0.05
CMTM3-208ENST00000564247 SNTB1Q13884 538 aaKnown RBP14.76□□□□□ -0.05
CMTM3-208ENST00000564247 MED22Q15528 200 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 TBCEQ15813 527 aaPredicted RBP14.76□□□□□ -0.05
CMTM3-208ENST00000564247 TP53I3Q53FA7 332 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 PABPC1L2AQ5JQF8 200 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 ZNF774Q6NX45 483 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 LRRN1Q6UXK5 716 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 RFLNBQ8N5W9 214 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 WDR31Q8NA23 367 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 OR1F12Q8NHA8 337 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 HAVCR2Q8TDQ0 301 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 SPRYD4Q8WW59 207 aaPredicted RBP14.76□□□□□ -0.05
CMTM3-208ENST00000564247 GATAD2BQ8WXI9 593 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 FCGR1BQ92637 280 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 RORBQ92753 470 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 SPTSSAQ969W0 71 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 AMELYQ99218 206 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 NIPAL2Q9H841 368 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 ACOT13Q9NPJ3 140 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 BABAM2Q9NXR7 383 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 ZNF224Q9NZL3 707 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 CRIM1Q9NZV1 1036 aa14.76□□□□□ -0.05
CMTM3-208ENST00000564247 A0A1W2PR80 420 aa14.75□□□□□ -0.05
CMTM3-208ENST00000564247 MAGEB4O15481 346 aaPredicted RBP14.75□□□□□ -0.05
CMTM3-208ENST00000564247 CBR1P16152 277 aa14.75□□□□□ -0.05
CMTM3-208ENST00000564247 HTR5AP47898 357 aa14.75□□□□□ -0.05
CMTM3-208ENST00000564247 OR12D2P58182 307 aa14.75□□□□□ -0.05
CMTM3-208ENST00000564247 SPHARQ15513 63 aa14.75□□□□□ -0.05
CMTM3-208ENST00000564247 OR2G6Q5TZ20 316 aa14.75□□□□□ -0.05
CMTM3-208ENST00000564247 ZNF544Q6NX49 715 aa14.75□□□□□ -0.05
CMTM3-208ENST00000564247 VASH1Q7L8A9 365 aaPredicted RBP14.75□□□□□ -0.05
CMTM3-208ENST00000564247 MDP1Q86V88 176 aa14.75□□□□□ -0.05
CMTM3-208ENST00000564247 AKR7LQ8NHP1 331 aa14.75□□□□□ -0.05
CMTM3-208ENST00000564247 FAM222BQ8WU58 562 aa14.75□□□□□ -0.05
CMTM3-208ENST00000564247 C4orf36Q96KX1 117 aa14.75□□□□□ -0.05
CMTM3-208ENST00000564247 COQ7Q99807 217 aa14.75□□□□□ -0.05
CMTM3-208ENST00000564247 ATF6BQ99941 703 aa14.75□□□□□ -0.05
CMTM3-208ENST00000564247 WNT5BQ9H1J7 359 aa14.75□□□□□ -0.05
CMTM3-208ENST00000564247 ISG20L2Q9H9L3 353 aaKnown RBP14.75□□□□□ -0.05
CMTM3-208ENST00000564247 NDRG3Q9UGV2 375 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms