RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 ZP4Q12836 540 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 MS4A18Q3C1V0 323 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 SKA3Q8IX90 412 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 DMRTC2Q8IXT2 367 aaPredicted RBP15.79■□□□□ 0.12
GDE1-203ENST00000564172 KDM8Q8N371 416 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 PFDN5Q99471 154 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 PIGQQ9BRB3 760 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 BOKQ9UMX3 212 aaPredicted RBP15.79■□□□□ 0.12
GDE1-203ENST00000564172 HDGFL3Q9Y3E1 203 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 PLGP00747 810 aaPredicted RBP15.79■□□□□ 0.12
GDE1-203ENST00000564172 SPP1P10451 314 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 ATP6V1E1P36543 226 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 CCL11P51671 97 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 DEFA5Q01523 94 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 TLE3Q04726 772 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 MFAP5Q13361 173 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 TSTQ16762 297 aaKnown RBP15.79■□□□□ 0.12
GDE1-203ENST00000564172 MESTQ5EB52 335 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 LEG1Q6P5S2 330 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 PAQR6Q6TCH4 344 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 YRDCQ86U90 279 aaKnown RBP15.79■□□□□ 0.12
GDE1-203ENST00000564172 SULF2Q8IWU5 870 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 ZNF454Q8N9F8 522 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 OR51G2Q8NGK0 314 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 RNASE11Q8TAA1 199 aaKnown RBP15.79■□□□□ 0.12
GDE1-203ENST00000564172 LURAP1Q96LR2 239 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 NMNAT2Q9BZQ4 307 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 OPA3Q9H6K4 179 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 CHST11Q9NPF2 352 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 DLL4Q9NR61 685 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 B3GALT5Q9Y2C3 310 aa15.79■□□□□ 0.12
GDE1-203ENST00000564172 EFSO43281 561 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 ATG12O94817 140 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 AKR7A3O95154 331 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 COX5BP10606 129 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 B3GALT5-AS1P59052 145 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 PPA1Q15181 289 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 ACKR1Q16570 336 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 DHRS7BQ6IAN0 325 aaPredicted RBP15.78■□□□□ 0.12
GDE1-203ENST00000564172 HAGHLQ6PII5 290 aaPredicted RBP15.78■□□□□ 0.12
GDE1-203ENST00000564172 NANOGP1Q8N7R0 232 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 ARIH2OSQ8N7S6 290 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 ZNF248Q8NDW4 579 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 MDS2Q8NDY4 140 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 PROKR2Q8NFJ6 384 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 HAS2Q92819 552 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 SCNM1Q9BWG6 230 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 TXNIPQ9H3M7 391 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 ASB6Q9NWX5 421 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 MRPS18CQ9Y3D5 142 aaKnown RBP15.78■□□□□ 0.12
GDE1-203ENST00000564172 HLA-DOBP13765 273 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 RPS2P15880 293 aaKnown RBP15.78■□□□□ 0.12
GDE1-203ENST00000564172 PPP3R1P63098 170 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 MED22Q15528 200 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 PLA1AQ53H76 456 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 TMPPEQ6ZT21 453 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 PDZD9Q8IXQ8 264 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 OR14L1PQ8NHC6 308 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 C5orf34Q96MH7 638 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 CMSS1Q9BQ75 279 aaKnown RBP15.78■□□□□ 0.12
GDE1-203ENST00000564172 SNTG1Q9NSN8 517 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 HAO2Q9NYQ3 351 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 GPR160Q9UJ42 338 aa15.78■□□□□ 0.12
GDE1-203ENST00000564172 C5orf52A6NGY3 159 aa15.77■□□□□ 0.12
GDE1-203ENST00000564172 J3QRE1 110 aa15.77■□□□□ 0.12
GDE1-203ENST00000564172 SP1P08047 785 aa15.77■□□□□ 0.12
GDE1-203ENST00000564172 SULT1A3P0DMM9 295 aa15.77■□□□□ 0.12
GDE1-203ENST00000564172 SULT1A4P0DMN0 295 aa15.77■□□□□ 0.12
GDE1-203ENST00000564172 DIO1P49895 249 aa15.77■□□□□ 0.12
GDE1-203ENST00000564172 RPL27P61353 136 aaKnown RBP15.77■□□□□ 0.12
GDE1-203ENST00000564172 SLC3A1Q07837 685 aa15.77■□□□□ 0.12
GDE1-203ENST00000564172 ALKBH1Q13686 389 aaKnown RBP15.77■□□□□ 0.12
GDE1-203ENST00000564172 TMEM99Q8N816 258 aa15.77■□□□□ 0.12
GDE1-203ENST00000564172 FDCSPQ8NFU4 85 aa15.77■□□□□ 0.12
GDE1-203ENST00000564172 OR51L1Q8NGJ5 315 aa15.77■□□□□ 0.12
GDE1-203ENST00000564172 ZNRF4Q8WWF5 429 aa15.77■□□□□ 0.12
GDE1-203ENST00000564172 AP3S1Q92572 193 aa15.77■□□□□ 0.12
GDE1-203ENST00000564172 MIB2Q96AX9 1013 aa15.77■□□□□ 0.12
GDE1-203ENST00000564172 OR51J1Q9H342 316 aa15.77■□□□□ 0.12
GDE1-203ENST00000564172 LSM2Q9Y333 95 aaKnown RBP15.77■□□□□ 0.12
GDE1-203ENST00000564172 ZFHX4Q86UP3 3567 aa15.77■□□□□ 0.11
GDE1-203ENST00000564172 C9orf170A2RU37 121 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 TRAPPC6AO75865 159 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 IGHMP01871 453 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 IGHA1P01876 353 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 SCG5P05408 212 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 FOLR2P14207 255 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 RAB4AP20338 218 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 GDF1P27539 372 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 PTGFRP43088 359 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 DOC2BQ14184 412 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 SSX1Q16384 188 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 GUCA2BQ16661 112 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 DEFB109BQ30KR1 87 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 CDNFQ49AH0 187 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 GALNTL5Q7Z4T8 443 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 KCNE4Q8WWG9 221 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 CMTM3Q96MX0 182 aa15.76■□□□□ 0.11
GDE1-203ENST00000564172 EXOSC1Q9Y3B2 195 aaKnown RBP15.76■□□□□ 0.11
GDE1-203ENST00000564172 SULT2B1O00204 365 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms