RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 OR4C45A6NMZ5 311 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 PRR32B1ATL7 298 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 MAGEB4O15481 346 aaPredicted RBP8.55□□□□□ -1.04
UBFD1-202ENST00000563366 MPZL1O95297 269 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 ISG15P05161 165 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 UCHL1P09936 223 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 SPINK2P20155 84 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 PSMD7P51665 324 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 NANOS3P60323 173 aaKnown RBP8.55□□□□□ -1.04
UBFD1-202ENST00000563366 ZNF45Q02386 682 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 MXD1Q05195 221 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 SCRN3Q0VDG4 424 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 ECH1Q13011 328 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 HNRNPA0Q13151 305 aaKnown RBP8.55□□□□□ -1.04
UBFD1-202ENST00000563366 TAF13Q15543 124 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 SGCAQ16586 387 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 SPANXN2Q5MJ10 180 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 TMEM244Q5VVB8 128 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 VHLLQ6RSH7 139 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 P4HA3Q7Z4N8 544 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 CATSPERDQ86XM0 798 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 LINC00346Q8IVM7 164 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 WDFY1Q8IWB7 410 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 FNDC9Q8TBE3 224 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 GMPPAQ96IJ6 420 aaPredicted RBP8.55□□□□□ -1.04
UBFD1-202ENST00000563366 CEP19Q96LK0 163 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 PSMG3-AS1Q96PY0 264 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 AMELYQ99218 206 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 PDCD1LG2Q9BQ51 273 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 MRI1Q9BV20 369 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 HDHD2Q9H0R4 259 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 TPK1Q9H3S4 243 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 CRLF2Q9HC73 371 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 SMURF1Q9HCE7 757 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 CENPMQ9NSP4 180 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 ING1Q9UK53 422 aaPredicted RBP8.55□□□□□ -1.04
UBFD1-202ENST00000563366 GTF2A1LQ9UNN4 478 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 RAXQ9Y2V3 346 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 CSAG2Q9Y5P2 127 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 LIPGQ9Y5X9 500 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 LHFPL6Q9Y693 200 aa8.55□□□□□ -1.04
UBFD1-202ENST00000563366 TRBV5-5A0A0J9YX44 114 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 TMEM269A0A1B0GVZ9 245 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 ZNF587BE7ETH6 402 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 RPL36A-HNRNPH2H7BZ11 118 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 RGS5O15539 181 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 ITGB2P05107 769 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 CST2P09228 141 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 INHBBP09529 407 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 OCM2P0CE71 109 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 PSKH1P11801 424 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 ZNF12P17014 697 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 RAB3BP20337 219 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 ACHEP22303 614 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 CD40LGP29965 261 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 CDAP32320 146 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 RANBP1P43487 201 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 PMP22Q01453 160 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 EIF2S3LQ2VIR3 472 aaKnown RBP8.54□□□□□ -1.04
UBFD1-202ENST00000563366 WDR38Q5JTN6 314 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 BCL2L15Q5TBC7 163 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 OR2A2Q6IF42 318 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 UNQ9370/PRO34162Q6UXP9 181 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 DPPA2Q7Z7J5 298 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 TSEN15Q8WW01 171 aaKnown RBP8.54□□□□□ -1.04
UBFD1-202ENST00000563366 HSD17B8Q92506 261 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 NABP1Q96AH0 204 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 APH1AQ96BI3 265 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 MAP6Q96JE9 813 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 WDFY2Q96P53 400 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 ALKBH3Q96Q83 286 aaPredicted RBP8.54□□□□□ -1.04
UBFD1-202ENST00000563366 OR14A2Q96R54 314 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 FOXB1Q99853 325 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 ATF6BQ99941 703 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 SP140LQ9H930 580 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 TCF7L1Q9HCS4 588 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 EMC7Q9NPA0 242 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 AKIP1Q9NQ31 210 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 DDX28Q9NUL7 540 aaKnown RBP8.54□□□□□ -1.04
UBFD1-202ENST00000563366 TMEM38BQ9NVV0 291 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 SPRR3Q9UBC9 169 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 CKLFQ9UBR5 152 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 ATPIF1Q9UII2 106 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 HHLA2Q9UM44 414 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 PMF1-BGLAPU3KQ54 211 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 DNAJC13O75165 2243 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 ZNF407Q9C0G0 2248 aa8.54□□□□□ -1.04
UBFD1-202ENST00000563366 ARHGAP21Q5T5U3 1957 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 PHF3Q92576 2039 aaKnown RBP8.53□□□□□ -1.04
UBFD1-202ENST00000563366 AHRRA9YTQ3 701 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 SRSF10O75494 262 aaKnown RBP8.53□□□□□ -1.04
UBFD1-202ENST00000563366 CTSSP25774 331 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 PTGER4P35408 488 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 ETV6P41212 452 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 BMXP51813 675 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 RPS11P62280 158 aaKnown RBP eCLIP8.53□□□□□ -1.04
UBFD1-202ENST00000563366 PPP3R1P63098 170 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 HIST1H3AP68431 136 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 RAB35Q15286 201 aa8.53□□□□□ -1.04
UBFD1-202ENST00000563366 CEACAM16Q2WEN9 425 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms