RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 SPATA3Q8NHX4 192 aa10.38□□□□□ -0.75
NSMCE1-204ENST00000563273 GTF3AQ92664 365 aaKnown RBP10.38□□□□□ -0.75
NSMCE1-204ENST00000563273 APOBEC3DQ96AK3 386 aaPredicted RBP10.38□□□□□ -0.75
NSMCE1-204ENST00000563273 TIMD4Q96H15 378 aa10.38□□□□□ -0.75
NSMCE1-204ENST00000563273 MDFIQ99750 246 aa10.38□□□□□ -0.75
NSMCE1-204ENST00000563273 REEP1Q9H902 201 aa10.38□□□□□ -0.75
NSMCE1-204ENST00000563273 RPRD1BQ9NQG5 326 aaKnown RBP10.38□□□□□ -0.75
NSMCE1-204ENST00000563273 CYB5R1Q9UHQ9 305 aa10.38□□□□□ -0.75
NSMCE1-204ENST00000563273 STARD10Q9Y365 291 aa10.38□□□□□ -0.75
NSMCE1-204ENST00000563273 GRIP1Q9Y3R0 1128 aa10.38□□□□□ -0.75
NSMCE1-204ENST00000563273 DNHD1Q96M86 4753 aa10.38□□□□□ -0.75
NSMCE1-204ENST00000563273 SURF4O15260 269 aa10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 TPD52L2O43399 206 aaKnown RBP10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 SPRY3O43610 288 aa10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 CDC14BO60729 498 aa10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 GASTP01350 101 aa10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 ANPEPP15144 967 aa10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 TNFSF4P23510 183 aa10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 GGT2P36268 569 aa10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 CCNIQ14094 377 aa10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 TSTQ16762 297 aaKnown RBP10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 DNAL1Q4LDG9 190 aa10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 ZNF362Q5T0B9 420 aaPredicted RBP10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 SLC18B1Q6NT16 456 aa10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 TRPM8Q7Z2W7 1104 aa10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 GLCCI1Q86VQ1 547 aa10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 AQP11Q8NBQ7 271 aa10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 SDR9C7Q8NEX9 313 aa10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 OR52E2Q8NGJ4 325 aa10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 OR2T4Q8NH00 348 aa10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 RAB1CQ92928 201 aa10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 RAB39BQ96DA2 213 aa10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 CMBLQ96DG6 245 aa10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 LRGUKQ96M69 825 aa10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 C1QTNF5Q9BXJ0 243 aa10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 EGLN3Q9H6Z9 239 aa10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 SRA1Q9HD15 236 aaKnown RBP10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 TMEFF2Q9UIK5 374 aaPredicted RBP10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 SAMHD1Q9Y3Z3 626 aaKnown RBP10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 WIPI2Q9Y4P8 454 aa10.37□□□□□ -0.75
NSMCE1-204ENST00000563273 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.36□□□□□ -0.755e-6■■■■□ 25.9
NSMCE1-204ENST00000563273 MXRA5Q9NR99 2828 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 COL6A5A8TX70 2615 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 TRAV20A0A0B4J274 112 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 A0A1B0GWJ7 208 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 IFNL4K9M1U5 179 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 WNT9BO14905 357 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 MSMBP08118 114 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 TNFRSF1AP19438 455 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 CENPAP49450 140 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 SLC25A1P53007 311 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 TNFAIP6P98066 277 aaPredicted RBP10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 MEP1BQ16820 701 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 CLEC12AQ5QGZ9 265 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 ACSM5Q6NUN0 579 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 SLC27A4Q6P1M0 643 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 ADGRG5Q8IZF4 528 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 TEX29Q8N6K0 151 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 OR2T33Q8NG76 320 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 OR8D4Q8NGM9 314 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 OR2AJ1Q8NGZ0 328 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 OR51F2Q8NH61 342 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 TMEM158Q8WZ71 300 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 SLC7A6Q92536 515 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 TMEM186Q96B77 213 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 PLA2G12AQ9BZM1 189 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 POFUT1Q9H488 388 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 PNRC2Q9NPJ4 139 aaKnown RBP10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 MRPL22Q9NWU5 206 aaKnown RBP10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 VNN3Q9NY84 501 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 TREM2Q9NZC2 230 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 IL19Q9UHD0 177 aa10.36□□□□□ -0.75
NSMCE1-204ENST00000563273 YLPM1P49750 1951 aaKnown RBP10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 FAM157AC9JC47 383 aa10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 DEAF1O75398 565 aaPredicted RBP10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 GPANK1O95872 356 aa10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 IGHV2-5P01817 119 aa10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 DBHP09172 617 aa10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 ACSM4P0C7M7 580 aa10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 ZNF823P16415 610 aa10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 SELEP16581 610 aa10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 BLVRAP53004 296 aa10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 PCK2Q16822 640 aa10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 RSPO1Q2MKA7 263 aaPredicted RBP10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 TEX30Q5JUR7 227 aa10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 SLC35F1Q5T1Q4 408 aa10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 OTPQ5XKR4 325 aa10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 CORO6Q6QEF8 472 aa10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 CFAP77Q6ZQR2 320 aa10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 Q6ZR03 302 aa10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 PEG10Q86TG7 708 aaKnown RBP10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 ZNF283Q8N7M2 679 aa10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 BCAS4Q8TDM0 211 aa10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 CCL17Q92583 94 aa10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 CCDC124Q96CT7 223 aaKnown RBP10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 PITX2Q99697 317 aa10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 ATF6BQ99941 703 aa10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 THTPAQ9BU02 230 aa10.35□□□□□ -0.75
NSMCE1-204ENST00000563273 RBM4Q9BWF3 364 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms