RNA–Protein interactions for RNA: ENST00000562789.5

COMMD4-207, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-207ENST00000562789 CSPG4Q6UVK1 2322 aa13.78□□□□□ -0.2
COMMD4-207ENST00000562789 FAM183AA6NL82 134 aa13.78□□□□□ -0.2
COMMD4-207ENST00000562789 VWC2LB2RUY7 222 aa13.78□□□□□ -0.2
COMMD4-207ENST00000562789 TIMM8AO60220 97 aaPredicted RBP13.78□□□□□ -0.2
COMMD4-207ENST00000562789 SPARCP09486 303 aa13.78□□□□□ -0.2
COMMD4-207ENST00000562789 OSMP13725 252 aa13.78□□□□□ -0.2
COMMD4-207ENST00000562789 GGT2P36268 569 aa13.78□□□□□ -0.2
COMMD4-207ENST00000562789 ZNF81P51508 661 aa13.78□□□□□ -0.2
COMMD4-207ENST00000562789 CCL8P80075 99 aa13.78□□□□□ -0.2
COMMD4-207ENST00000562789 PPP2R2BQ00005 443 aa13.78□□□□□ -0.2
COMMD4-207ENST00000562789 CCNIQ14094 377 aa13.78□□□□□ -0.2
COMMD4-207ENST00000562789 TMEM249Q2WGJ8 235 aa13.78□□□□□ -0.2
COMMD4-207ENST00000562789 PCGF3Q3KNV8 242 aa13.78□□□□□ -0.2
COMMD4-207ENST00000562789 TMEM255AQ5JRV8 349 aa13.78□□□□□ -0.2
COMMD4-207ENST00000562789 ZNF786Q8N393 782 aa13.78□□□□□ -0.2
COMMD4-207ENST00000562789 ZNF540Q8NDQ6 660 aa13.78□□□□□ -0.2
COMMD4-207ENST00000562789 ZNRF4Q8WWF5 429 aa13.78□□□□□ -0.2
COMMD4-207ENST00000562789 DCLRE1CQ96SD1 692 aaKnown RBP13.78□□□□□ -0.2
COMMD4-207ENST00000562789 ATF6BQ99941 703 aa13.78□□□□□ -0.2
COMMD4-207ENST00000562789 MED20Q9H944 212 aa13.78□□□□□ -0.2
COMMD4-207ENST00000562789 CYB5R1Q9UHQ9 305 aa13.78□□□□□ -0.2
COMMD4-207ENST00000562789 KCNG2Q9UJ96 466 aa13.78□□□□□ -0.2
COMMD4-207ENST00000562789 ZFHX3Q15911 3703 aa13.78□□□□□ -0.2
COMMD4-207ENST00000562789 INAFM1C9JVW0 142 aa13.77□□□□□ -0.21
COMMD4-207ENST00000562789 PAICSP22234 425 aaKnown RBP13.77□□□□□ -0.21
COMMD4-207ENST00000562789 GIFP27352 417 aa13.77□□□□□ -0.21
COMMD4-207ENST00000562789 FMO3P31513 532 aa13.77□□□□□ -0.21
COMMD4-207ENST00000562789 RGS6P49758 472 aa13.77□□□□□ -0.21
COMMD4-207ENST00000562789 SLC25A1P53007 311 aa13.77□□□□□ -0.21
COMMD4-207ENST00000562789 GINS1Q14691 196 aa13.77□□□□□ -0.21
COMMD4-207ENST00000562789 ATP6AP1Q15904 470 aa13.77□□□□□ -0.21
COMMD4-207ENST00000562789 TSTQ16762 297 aaKnown RBP13.77□□□□□ -0.21
COMMD4-207ENST00000562789 OR5K1Q8NHB7 308 aa13.77□□□□□ -0.21
COMMD4-207ENST00000562789 DNAJC9Q8WXX5 260 aa13.77□□□□□ -0.21
COMMD4-207ENST00000562789 RDH5Q92781 318 aa13.77□□□□□ -0.21
COMMD4-207ENST00000562789 UTP4Q969X6 686 aaKnown RBP13.77□□□□□ -0.21
COMMD4-207ENST00000562789 COG8Q96MW5 612 aa13.77□□□□□ -0.21
COMMD4-207ENST00000562789 SETD2Q9BYW2 2564 aaPredicted RBP13.77□□□□□ -0.21
COMMD4-207ENST00000562789 NMNAT2Q9BZQ4 307 aa13.77□□□□□ -0.21
COMMD4-207ENST00000562789 WDR76Q9H967 626 aa13.77□□□□□ -0.21
COMMD4-207ENST00000562789 NTN4Q9HB63 628 aa13.77□□□□□ -0.21
COMMD4-207ENST00000562789 PAPOLBQ9NRJ5 636 aaKnown RBP13.77□□□□□ -0.21
COMMD4-207ENST00000562789 DECR2Q9NUI1 292 aa13.77□□□□□ -0.21
COMMD4-207ENST00000562789 PTTG3PQ9NZH4 202 aa13.77□□□□□ -0.21
COMMD4-207ENST00000562789 AP4S1Q9Y587 144 aa13.77□□□□□ -0.21
COMMD4-207ENST00000562789 DYSFO75923 2080 aa13.76□□□□□ -0.21
COMMD4-207ENST00000562789 IGHV4-61A0A0C4DH41 118 aa13.76□□□□□ -0.21
COMMD4-207ENST00000562789 F5H5K5 113 aa13.76□□□□□ -0.21
COMMD4-207ENST00000562789 H0YHG0 523 aa13.76□□□□□ -0.21
COMMD4-207ENST00000562789 J3QW42 95 aa13.76□□□□□ -0.21
COMMD4-207ENST00000562789 SPRY3O43610 288 aa13.76□□□□□ -0.21
COMMD4-207ENST00000562789 CD5LO43866 347 aa13.76□□□□□ -0.21
COMMD4-207ENST00000562789 ZNF23P17027 643 aa13.76□□□□□ -0.21
COMMD4-207ENST00000562789 FASP25445 335 aa13.76□□□□□ -0.21
COMMD4-207ENST00000562789 ENTPD1P49961 510 aa13.76□□□□□ -0.21
COMMD4-207ENST00000562789 ZMAT1Q5H9K5 638 aa13.76□□□□□ -0.21
COMMD4-207ENST00000562789 ASRGL1Q7L266 308 aa13.76□□□□□ -0.21
COMMD4-207ENST00000562789 ZNF511Q8NB15 262 aa13.76□□□□□ -0.21
COMMD4-207ENST00000562789 APOBEC3DQ96AK3 386 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-207ENST00000562789 NRBF2Q96F24 287 aa13.76□□□□□ -0.21
COMMD4-207ENST00000562789 PLEKHA8Q96JA3 519 aa13.76□□□□□ -0.21
COMMD4-207ENST00000562789 MAP6Q96JE9 813 aa13.76□□□□□ -0.21
COMMD4-207ENST00000562789 HCAR1Q9BXC0 346 aa13.76□□□□□ -0.21
COMMD4-207ENST00000562789 TEX12Q9BXU0 123 aa13.76□□□□□ -0.21
COMMD4-207ENST00000562789 CHODLQ9H9P2 273 aa13.76□□□□□ -0.21
COMMD4-207ENST00000562789 SAP30LQ9HAJ7 183 aa13.76□□□□□ -0.21
COMMD4-207ENST00000562789 CYSLTR2Q9NS75 346 aa13.76□□□□□ -0.21
COMMD4-207ENST00000562789 CGGBP1Q9UFW8 167 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-207ENST00000562789 STARD10Q9Y365 291 aa13.76□□□□□ -0.21
COMMD4-207ENST00000562789 HIVEP2P31629 2446 aa13.76□□□□□ -0.21
COMMD4-207ENST00000562789 ABCA2Q9BZC7 2435 aa13.76□□□□□ -0.21
COMMD4-207ENST00000562789 MALRD1Q5VYJ5 2156 aa13.75□□□□□ -0.21
COMMD4-207ENST00000562789 ZSCAN5BA6NJL1 495 aa13.75□□□□□ -0.21
COMMD4-207ENST00000562789 PRR23D1E9PI22 279 aaPredicted RBP13.75□□□□□ -0.21
COMMD4-207ENST00000562789 CDC14BO60729 498 aa13.75□□□□□ -0.21
COMMD4-207ENST00000562789 PRR23D2P0DMB1 279 aaPredicted RBP13.75□□□□□ -0.21
COMMD4-207ENST00000562789 PSKH1P11801 424 aa13.75□□□□□ -0.21
COMMD4-207ENST00000562789 FCGR1AP12314 374 aa13.75□□□□□ -0.21
COMMD4-207ENST00000562789 ZNF16P17020 682 aaPredicted RBP13.75□□□□□ -0.21
COMMD4-207ENST00000562789 ACHEP22303 614 aa13.75□□□□□ -0.21
COMMD4-207ENST00000562789 TUBG1P23258 451 aa13.75□□□□□ -0.21
COMMD4-207ENST00000562789 MMP15P51511 669 aa13.75□□□□□ -0.21
COMMD4-207ENST00000562789 BLVRAP53004 296 aa13.75□□□□□ -0.21
COMMD4-207ENST00000562789 ECH1Q13011 328 aa13.75□□□□□ -0.21
COMMD4-207ENST00000562789 PSG7Q13046 419 aa13.75□□□□□ -0.21
COMMD4-207ENST00000562789 ACSM5Q6NUN0 579 aa13.75□□□□□ -0.21
COMMD4-207ENST00000562789 PLBD1Q6P4A8 553 aa13.75□□□□□ -0.21
COMMD4-207ENST00000562789 DCXRQ7Z4W1 244 aa13.75□□□□□ -0.21
COMMD4-207ENST00000562789 HIPK1Q86Z02 1210 aa13.75□□□□□ -0.21
COMMD4-207ENST00000562789 OR5L1Q8NGL2 311 aa13.75□□□□□ -0.21
COMMD4-207ENST00000562789 LRTOMTQ8WZ04 291 aa13.75□□□□□ -0.21
COMMD4-207ENST00000562789 YIPF5Q969M3 257 aa13.75□□□□□ -0.21
COMMD4-207ENST00000562789 MSL2Q9HCI7 577 aa13.75□□□□□ -0.21
COMMD4-207ENST00000562789 PNRC2Q9NPJ4 139 aaKnown RBP13.75□□□□□ -0.21
COMMD4-207ENST00000562789 YAE1D1Q9NRH1 226 aa13.75□□□□□ -0.21
COMMD4-207ENST00000562789 TUBG2Q9NRH3 451 aa13.75□□□□□ -0.21
COMMD4-207ENST00000562789 KRT84Q9NSB2 600 aa13.75□□□□□ -0.21
COMMD4-207ENST00000562789 ZNF275Q9NSD4 429 aaPredicted RBP13.75□□□□□ -0.21
COMMD4-207ENST00000562789 NKIRAS2Q9NYR9 191 aa13.75□□□□□ -0.21
COMMD4-207ENST00000562789 PURGQ9UJV8 347 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms