RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 RCAN2Q14206 197 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 PSMD5Q16401 504 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 SOHLH1Q5JUK2 328 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 CALHM3Q86XJ0 350 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 CDKL3Q8IVW4 592 aaPredicted RBP1.58□□□□□ -2.16
DENND4A-205ENST00000562540 OSR2Q8N2R0 312 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 COX18Q8N8Q8 333 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 PRELID2Q8N945 189 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 CHST4Q8NCG5 386 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 OR7G2Q8NG99 324 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 OR4A4PQ8NGN8 299 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 OR6N1Q8NGY5 312 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 OR13G1Q8NGZ3 307 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 APH1BQ8WW43 257 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 RTN4IP1Q8WWV3 396 aaPredicted RBP1.58□□□□□ -2.16
DENND4A-205ENST00000562540 ELMO1Q92556 727 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 EEF1AKMT3Q96AZ1 226 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 RASD2Q96D21 266 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 ECHDC3Q96DC8 303 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 PLIN2Q99541 437 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 LZTS2Q9BRK4 669 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 TIMM29Q9BSF4 260 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 ZNF717Q9BY31 904 aaPredicted RBP1.58□□□□□ -2.16
DENND4A-205ENST00000562540 RACGAP1Q9H0H5 632 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 TMEM9BQ9NQ34 198 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 HPCAL4Q9UM19 191 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 DHX57Q6P158 1386 aaKnown RBP1.58□□□□□ -2.16
DENND4A-205ENST00000562540 C2orf16Q68DN1 1984 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 THADAQ6YHU6 1953 aa1.58□□□□□ -2.16
DENND4A-205ENST00000562540 CACNA1DQ01668 2161 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 CENPVL3A0A0U1RRI6 287 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 GOLGA8OA6NCC3 632 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 GOLGA8NF8WBI6 632 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 H0YJW9 148 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 DNASE2O00115 360 aaPredicted RBP1.57□□□□□ -2.16
DENND4A-205ENST00000562540 SOCS1O15524 211 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 RNF13O43567 381 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 CHST1O43916 411 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 CD74P04233 296 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 OR8U9P0C7N5 309 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 CT45A6P0DMU7 189 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 CT45A5P0DMU8 189 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 CT45A7P0DMV0 189 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 RNASE2P10153 161 aaKnown RBP1.57□□□□□ -2.16
DENND4A-205ENST00000562540 IL1RNP18510 177 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 KIR3DL2P43630 455 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 CRADDP78560 199 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 PRR3P79522 188 aaKnown RBP1.57□□□□□ -2.16
DENND4A-205ENST00000562540 MPV17L2Q567V2 206 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 CT45A1Q5HYN5 189 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 RAET1LQ5VY80 246 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 C22orf42Q6IC83 251 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 REEP3Q6NUK4 255 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 UNQ9165/PRO28630Q6UXU0 137 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 SLC16A13Q7RTY0 426 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 MRPL55Q7Z7F7 128 aaKnown RBP1.57□□□□□ -2.16
DENND4A-205ENST00000562540 NKAIN4Q8IVV8 208 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 CDH26Q8IXH8 852 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 OR10AD1Q8NGE0 317 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 CT45A3Q8NHU0 189 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 OR51E1Q8TCB6 317 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 CAPSLQ8WWF8 208 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 SLC38A4Q969I6 547 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 SLC25A46Q96AG3 418 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 SLC38A10Q9HBR0 1119 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 CCDC59Q9P031 241 aaKnown RBP1.57□□□□□ -2.16
DENND4A-205ENST00000562540 SIGLEC9Q9Y336 463 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 TSSC4Q9Y5U2 329 aaPredicted RBP1.57□□□□□ -2.16
DENND4A-205ENST00000562540 TNS2Q63HR2 1409 aa1.57□□□□□ -2.16
DENND4A-205ENST00000562540 TRIP11Q15643 1979 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 XKRY2A2RUG3 117 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 ZNF716A6NP11 495 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 A8MUU9 505 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 SMKR1H3BMG3 65 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 H7C417 338 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 K7EMT4 169 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 NDUFAB1O14561 156 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 SCAMP2O15127 329 aaKnown RBP1.56□□□□□ -2.16
DENND4A-205ENST00000562540 REM1O75628 298 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 SEMA3DO95025 777 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 H6PDO95479 791 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 HLA-DQB1P01920 261 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 ZNF735P0CB33 412 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 CD37P11049 281 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 ME2P23368 584 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 TAS2R31P59538 309 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 TGM3Q08188 693 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 ARMC12Q5T9G4 340 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 PRAMEF20Q5VT98 475 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 TTC23LQ6PF05 361 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 CMC1Q7Z7K0 106 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 CMTM1Q8IZ96 169 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 TMEM256Q8N2U0 113 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 OR11H7Q8NGC8 314 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 OR52E2Q8NGJ4 325 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 NUBPLQ8TB37 319 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 RAB3IL1Q8TBN0 382 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 CIRBP-AS1Q8TBR5 109 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 ACMSDQ8TDX5 336 aa1.56□□□□□ -2.16
DENND4A-205ENST00000562540 C17orf50Q8WW18 174 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms