RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 KHDRBS3O75525 346 aaKnown RBP14□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 NDUFB2O95178 105 aa14□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 GPANK1O95872 356 aa14□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 WNT2P09544 360 aa14□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 CD80P33681 288 aa14□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 SLC7A2P52569 658 aa14□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 PAX8Q06710 450 aa14□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 C8orf82Q6P1X6 216 aaPredicted RBP14□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 FBXW12Q6X9E4 464 aa14□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 PTCHD4Q6ZW05 846 aa14□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 MUC20Q8N307 709 aaPredicted RBP14□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 ATG16L2Q8NAA4 619 aa14□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 GPA33Q99795 319 aa14□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 NUAK2Q9H093 628 aa14□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 ANKRD19PQ9H560 264 aa14□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 OR5V1Q9UGF6 321 aa14□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 TMEM5Q9Y2B1 443 aa14□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 LRCH1Q9Y2L9 728 aa14□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 SOX21Q9Y651 276 aaPredicted RBP14□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 ENPP4Q9Y6X5 453 aa14□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 H0YL77 283 aa13.99□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 J3QW42 95 aa13.99□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 SOCS2O14508 198 aa13.99□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 SLC22A2O15244 555 aa13.99□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 MLNRO43193 412 aa13.99□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 ZNF205O95201 554 aa13.99□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 CYB5R3P00387 301 aaPredicted RBP13.99□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 IGHV4-38-2P0DP08 117 aa13.99□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 OMPP47874 163 aa13.99□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 GSK3BP49841 420 aa13.99□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 BAMBIQ13145 260 aa13.99□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 KCNMB1Q16558 191 aa13.99□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 GPR139Q6DWJ6 353 aa13.99□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 OR2T2Q6IF00 324 aa13.99□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 SHISA2Q6UWI4 295 aa13.99□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 RRM2BQ7LG56 351 aa13.99□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 OR8G5Q8NG78 346 aa13.99□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 RP9Q8TA86 221 aaKnown RBP13.99□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 TAF15Q92804 592 aaKnown RBP eCLIP13.99□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 MEGF10Q96KG7 1140 aa13.99□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 SSBP3Q9BWW4 388 aaPredicted RBP13.99□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 ZMAT3Q9HA38 289 aaKnown RBP13.99□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 ATPIF1Q9UII2 106 aa13.99□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 CMYA5Q8N3K9 4069 aa13.99□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 IGHV3OR16-10A0A075B7F0 116 aa13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 IGHV3-64DA0A0J9YX35 117 aa13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 A0A1W2PRQ8 180 aa13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 DCTN6O00399 190 aa13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 GSTA4O15217 222 aa13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 RNASE1P07998 156 aaKnown RBP13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 NCK1P16333 377 aa13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 CDKN2AP42771 156 aaKnown RBP13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 RGS6P49758 472 aa13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 HIST1H3AP68431 136 aa13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 DGCR6Q14129 220 aa13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 MEP1BQ16820 701 aa13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 HIST2H3PS2Q5TEC6 136 aa13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 HIST2H3AQ71DI3 136 aa13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 ADCK1Q86TW2 530 aa13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 JAZF1Q86VZ6 243 aa13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 CYP4Z1Q86W10 505 aa13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 PARP8Q8N3A8 854 aa13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 DACT3Q96B18 629 aaPredicted RBP13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 RSRC1Q96IZ7 334 aaKnown RBP13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 TSSK2Q96PF2 358 aa13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 NDEL1Q9GZM8 345 aa13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 ZNF696Q9H7X3 374 aa13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 TMEM165Q9HC07 324 aa13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 ARGLU1Q9NWB6 273 aaPredicted RBP13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 IER3IP1Q9Y5U9 82 aa13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 LHFPL6Q9Y693 200 aa13.98□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 IFNL4K9M1U5 179 aa13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 H1F0P07305 194 aaKnown RBP13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 PPIAL4GP0DN37 164 aa13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 COX4I1P13073 169 aa13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 RPS2P15880 293 aaKnown RBP13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 SELEP16581 610 aa13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 DBPQ10586 325 aaPredicted RBP13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 SEC23BQ15437 767 aa13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 SLC9A3R2Q15599 337 aa13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 SLC27A4Q6P1M0 643 aa13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 C9orf139Q6ZV77 190 aa13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 MOGAT3Q86VF5 341 aa13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 KLBQ86Z14 1044 aa13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 BHLHE23Q8NDY6 225 aa13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 OR52E2Q8NGJ4 325 aa13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 OR5L1Q8NGL2 311 aa13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 OR13G1Q8NGZ3 307 aa13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 FAM162AQ96A26 154 aa13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 APOBEC3DQ96AK3 386 aaPredicted RBP13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 ZNF582Q96NG8 517 aaPredicted RBP13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 HOPXQ9BPY8 73 aaPredicted RBP13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 SLC30A2Q9BRI3 323 aa13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 TMEM246Q9BRR3 403 aa13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 MS4A7Q9GZW8 240 aaPredicted RBP13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 WDR76Q9H967 626 aa13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 NDUFAF4Q9P032 175 aa13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 POLR1DQ9Y2S0 133 aa13.97□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 IGHV2-70DA0A0C4DH43 119 aa13.96□□□□□ -0.17
VPS9D1-AS1-201ENST00000562298 TRBV4-1A0A0J9YWV2 114 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms