RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 RASD2Q96D21 266 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 HAVCR1Q96D42 359 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 BPIFA2Q96DR5 249 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 TPD52L3Q96J77 140 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 Q96M85 177 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 PCDHAC1Q9H158 963 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 TOR3AQ9H497 397 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 KAT8Q9H7Z6 458 aaKnown RBP9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 SMURF2Q9HAU4 748 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 SMURF1Q9HCE7 757 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 MIOXQ9UGB7 285 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 SNX13Q9Y5W8 968 aa9.7□□□□□ -0.86
NSMCE1-202ENST00000561960 IGHV3OR15-7A0A075B7D8 119 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 H3BSA7 217 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 ANGPT2O15123 496 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 SURF4O15260 269 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 FAM20BO75063 409 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 TOX4O94842 621 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 TSPAN19P0C672 248 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 CTLA4P16410 223 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 ZNF26P17031 533 aaPredicted RBP9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 ANOS1P23352 680 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 RPL4P36578 427 aaKnown RBP9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 CFHR2P36980 270 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 GZMMP51124 257 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 FHL1Q13642 323 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 CCDC92Q53HC0 331 aaPredicted RBP9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 MESTQ5EB52 335 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 TBPL2Q6SJ96 375 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 ZNF841Q6ZN19 808 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 ZNF620Q6ZNG0 422 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 PATL1Q86TB9 770 aaKnown RBP9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 NRMQ8IXM6 262 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 LRRC75AQ8NAA5 344 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 SCCPDHQ8NBX0 429 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 ITPKCQ96DU7 683 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 PLEKHA8Q96JA3 519 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 ALG12Q9BV10 488 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 NDRG4Q9ULP0 352 aaKnown RBP9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 HIF3AQ9Y2N7 669 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 COA3Q9Y2R0 106 aaPredicted RBP9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 SIGLEC9Q9Y336 463 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 NDUFAF1Q9Y375 327 aa9.69□□□□□ -0.86
NSMCE1-202ENST00000561960 A0A1B0GW55 424 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 ELOVL7A1L3X0 281 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 CENPBD1B2RD01 187 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 ICMTO60725 284 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 ERLIN1O75477 346 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 FCN3O75636 299 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 ALX3O95076 343 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 NDUFA7O95182 113 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 OR5F1O95221 314 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 DUX4L2P0CJ85 424 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 DUX4L3P0CJ86 424 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 DUX4L4P0CJ87 422 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 DUX4L5P0CJ88 424 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 DUX4L6P0CJ89 424 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 DUX4L7P0CJ90 424 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 FPR3P25089 353 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 RBM34P42696 430 aaKnown RBP9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 MRPL19P49406 292 aaKnown RBP9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 SRP9P49458 86 aaKnown RBP9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 PROK1P58294 105 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 ARF6P62330 175 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 EGR3Q06889 387 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 VMACQ2NL98 169 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 ZNF362Q5T0B9 420 aaPredicted RBP9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 DUX4L9Q6RFH8 374 aaPredicted RBP9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 Q6ZSV7 163 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 FOXL2NBQ6ZUU3 175 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 NLRC3Q7RTR2 1065 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 NAA40Q86UY6 237 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 LNX2Q8N448 690 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 PNKDQ8N490 385 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 OR8G5Q8NG78 346 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 OR1F12Q8NHA8 337 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 PTP4A1Q93096 173 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 ZNF582Q96NG8 517 aaPredicted RBP9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 TSSK2Q96PF2 358 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 SLC30A2Q9BRI3 323 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 EVA1AQ9H8M9 152 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 TBCCD1Q9NVR7 557 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 DUX4Q9UBX2 424 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 POLR1DQ9Y2S0 133 aa9.68□□□□□ -0.86
NSMCE1-202ENST00000561960 TEX13CA0A0J9YWL9 993 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 EFCAB9A8MZ26 197 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 SOCS2O14508 198 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 CDC42EP2O14613 210 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 SLC16A7O60669 478 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 GYPAP02724 150 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 MMP9P14780 707 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 PAX6P26367 422 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 SCRN3Q0VDG4 424 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 KLRD1Q13241 179 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 MAB21L1Q13394 359 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 OR8B8Q15620 311 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 FAM189A2Q15884 450 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 CYBRD1Q53TN4 286 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 Q6ZPA2 131 aa9.67□□□□□ -0.86
NSMCE1-202ENST00000561960 ZNF826PQ6ZT77 177 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms