RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 CARD18P57730 90 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 HIST1H3AP68431 136 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 CXADRP78310 365 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 ADAM8P78325 824 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 MFGE8Q08431 387 aaPredicted RBP5.77□□□□□ -1.49
CAPN3-210ENST00000561817 CDC20Q12834 499 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 BCL2A1Q16548 175 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 YIF1BQ5BJH7 314 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 HIST2H3PS2Q5TEC6 136 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 AGAP7PQ5VUJ5 663 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 HBMQ6B0K9 141 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 DEGS2Q6QHC5 323 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 LRRN1Q6UXK5 716 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 HIST2H3AQ71DI3 136 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 NLRC3Q7RTR2 1065 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 HDDC2Q7Z4H3 204 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 TPRA1Q86W33 373 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 CATSPERDQ86XM0 798 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 SPACA3Q8IXA5 215 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 C20orf196Q8IYI0 205 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 PARP16Q8N5Y8 322 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 YIPF7Q8N8F6 280 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 OR10AC1Q8NH08 325 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 OR52N5Q8NH56 324 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 OR10D3Q8NH80 312 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 THEM6Q8WUY1 208 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 RNF133Q8WVZ7 376 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 PHYHIPQ92561 330 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 NABP1Q96AH0 204 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 AGAP4Q96P64 663 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 DERL3Q96Q80 235 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 RBP7Q96R05 134 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 KCNS3Q9BQ31 491 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 TTYH2Q9BSA4 534 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 C6orf62Q9GZU0 229 aaPredicted RBP5.77□□□□□ -1.49
CAPN3-210ENST00000561817 SLC6A15Q9H2J7 730 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 KCNN2Q9H2S1 579 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 TPK1Q9H3S4 243 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 HMG20AQ9NP66 347 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 ACKR4Q9NPB9 350 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 PNRC2Q9NPJ4 139 aaKnown RBP5.77□□□□□ -1.49
CAPN3-210ENST00000561817 G6PC2Q9NQR9 355 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 POLE4Q9NR33 117 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 GLTPQ9NZD2 209 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 CRNNQ9UBG3 495 aaPredicted RBP5.77□□□□□ -1.49
CAPN3-210ENST00000561817 ZNF281Q9Y2X9 895 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 KLF13Q9Y2Y9 288 aaPredicted RBP5.77□□□□□ -1.49
CAPN3-210ENST00000561817 CSAG2Q9Y5P2 127 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 FLVCR1Q9Y5Y0 555 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 LHFPL6Q9Y693 200 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 V9GYH0 126 aa5.77□□□□□ -1.49
CAPN3-210ENST00000561817 PHF3Q92576 2039 aaKnown RBP5.77□□□□□ -1.49
CAPN3-210ENST00000561817 ZNF407Q9C0G0 2248 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 A6NL46 340 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 FAM166BA8MTA8 275 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 ZNF879B4DU55 563 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 CASKO14936 926 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 ZNF254O75437 659 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 TRAPPC6AO75865 159 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 RPP14O95059 124 aaKnown RBP5.76□□□□□ -1.49
CAPN3-210ENST00000561817 SERPINA3P01011 423 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 HLA-DQA2P01906 255 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 QDPRP09417 244 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 CD37P11049 281 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 APEX1P27695 318 aaKnown RBP5.76□□□□□ -1.49
CAPN3-210ENST00000561817 CDAP32320 146 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 DCTDP32321 178 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 MAGEA5P43359 124 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 SELENOPP49908 381 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 OR10A3P58181 314 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 CLRN1P58418 232 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 ARF1P84077 181 aaKnown RBP5.76□□□□□ -1.49
CAPN3-210ENST00000561817 ZNF45Q02386 682 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 PMS2P11Q13670 270 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 EIF2B1Q14232 305 aaKnown RBP5.76□□□□□ -1.49
CAPN3-210ENST00000561817 ENDOGQ14249 297 aaKnown RBP5.76□□□□□ -1.49
CAPN3-210ENST00000561817 ZNF79Q15937 498 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 SLC25A35Q3KQZ1 300 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 WDR38Q5JTN6 314 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 CARD17Q5XLA6 110 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 ASPHD2Q6ICH7 369 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 CORO6Q6QEF8 472 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 PAMR1Q6UXH9 720 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 Q6ZNX1 250 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 CFAP77Q6ZQR2 320 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 LINGO2Q7L985 606 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 FAM220AQ7Z4H9 259 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 DCXRQ7Z4W1 244 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-210ENST00000561817 LRRTM1Q86UE6 522 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 GPAT4Q86UL3 456 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 LINC00346Q8IVM7 164 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 LAX1Q8IWV1 398 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 PRR18Q8N4B5 295 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 FDCSPQ8NFU4 85 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 ROBO4Q8WZ75 1007 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 NSMAFQ92636 917 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 PPP1R14AQ96A00 147 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 TMEM45BQ96B21 275 aa5.76□□□□□ -1.49
CAPN3-210ENST00000561817 INTS12Q96CB8 462 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms