RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 ERFP50548 548 aa8.7□□□□□ -1.02
CLK3-205ENST00000561673 HIST1H3AP68431 136 aa8.7□□□□□ -1.02
CLK3-205ENST00000561673 SLC3A1Q07837 685 aa8.7□□□□□ -1.02
CLK3-205ENST00000561673 HLXQ14774 488 aaPredicted RBP8.7□□□□□ -1.02
CLK3-205ENST00000561673 RSPO1Q2MKA7 263 aaPredicted RBP8.7□□□□□ -1.02
CLK3-205ENST00000561673 OXLD1Q5BKU9 147 aa8.7□□□□□ -1.02
CLK3-205ENST00000561673 C4orf48Q5BLP8 95 aa8.7□□□□□ -1.02
CLK3-205ENST00000561673 ZMAT1Q5H9K5 638 aa8.7□□□□□ -1.02
CLK3-205ENST00000561673 HIST2H3PS2Q5TEC6 136 aa8.7□□□□□ -1.02
CLK3-205ENST00000561673 DNM1P34Q6PK57 102 aa8.7□□□□□ -1.02
CLK3-205ENST00000561673 CORO6Q6QEF8 472 aa8.7□□□□□ -1.02
CLK3-205ENST00000561673 C16orf89Q6UX73 402 aa8.7□□□□□ -1.02
CLK3-205ENST00000561673 HIST2H3AQ71DI3 136 aa8.7□□□□□ -1.02
CLK3-205ENST00000561673 JAZF1Q86VZ6 243 aa8.7□□□□□ -1.02
CLK3-205ENST00000561673 ZDHHC21Q8IVQ6 265 aa8.7□□□□□ -1.02
CLK3-205ENST00000561673 GJC3Q8NFK1 279 aa8.7□□□□□ -1.02
CLK3-205ENST00000561673 OR2Z1Q8NG97 314 aa8.7□□□□□ -1.02
CLK3-205ENST00000561673 OR4K13Q8NH42 304 aa8.7□□□□□ -1.02
CLK3-205ENST00000561673 GNPDA2Q8TDQ7 276 aa8.7□□□□□ -1.02
CLK3-205ENST00000561673 RAB39BQ96DA2 213 aa8.7□□□□□ -1.02
CLK3-205ENST00000561673 COG8Q96MW5 612 aa8.7□□□□□ -1.02
CLK3-205ENST00000561673 IFT27Q9BW83 186 aa8.7□□□□□ -1.02
CLK3-205ENST00000561673 METTL17Q9H7H0 456 aaPredicted RBP8.7□□□□□ -1.02
CLK3-205ENST00000561673 DCAF16Q9NXF7 216 aa8.7□□□□□ -1.02
CLK3-205ENST00000561673 ATPIF1Q9UII2 106 aa8.7□□□□□ -1.02
CLK3-205ENST00000561673 TMCC3Q9ULS5 477 aa8.7□□□□□ -1.02
CLK3-205ENST00000561673 POLR1DQ9Y2S0 133 aa8.7□□□□□ -1.02
CLK3-205ENST00000561673 ISPDA4D126 451 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 OR6C68A6NDL8 312 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 IDH3BO43837 385 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 KRT36O76013 467 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 RENP00797 406 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 SBK2P0C263 348 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 RAC2P15153 192 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 TNFSF4P23510 183 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 NOS3P29474 1203 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 RGS6P49758 472 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 HMGA2P52926 109 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 MXRA7P84157 204 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 COX10Q12887 443 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 TSPAN31Q12999 210 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 SPATS1Q496A3 300 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 SLC35F1Q5T1Q4 408 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 PGBD2Q6P3X8 592 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 PGM2L1Q6PCE3 622 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 CYP2R1Q6VVX0 501 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 FBXW12Q6X9E4 464 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 ZNF620Q6ZNG0 422 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 PEG10Q86TG7 708 aaKnown RBP8.69□□□□□ -1.02
CLK3-205ENST00000561673 ZBTB46Q86UZ6 589 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 OR5AS1Q8N127 324 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 SLC26A10Q8NG04 563 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 OR5L1Q8NGL2 311 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 DCLRE1CQ96SD1 692 aaKnown RBP8.69□□□□□ -1.02
CLK3-205ENST00000561673 COQ7Q99807 217 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 GAL3ST1Q99999 423 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 TMPRSS13Q9BYE2 586 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 RPRD1BQ9NQG5 326 aaKnown RBP8.69□□□□□ -1.02
CLK3-205ENST00000561673 TMEM106BQ9NUM4 274 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 NDE1Q9NXR1 346 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 UBAP1Q9NZ09 502 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 PTTG3PQ9NZH4 202 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 NPTNQ9Y639 398 aa8.69□□□□□ -1.02
CLK3-205ENST00000561673 LOC105371242A0A075B767 164 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 A0A0G2JMP0 313 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 A0A0X1KG70 313 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 B2RBV5 119 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 J3QW42 95 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 VENTXO95231 258 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 IGHV2-70P01814 119 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 TNFRSF1AP19438 455 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 ZFP36P26651 326 aaKnown RBP8.68□□□□□ -1.02
CLK3-205ENST00000561673 MNAT1P51948 309 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 LCN2P80188 198 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 KRTAP27-1Q3LI81 207 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 CLEC12AQ5QGZ9 265 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 DCAF12L2Q5VW00 463 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 OR2T2Q6IF00 324 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 SLC18B1Q6NT16 456 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 SHQ1Q6PI26 577 aaKnown RBP8.68□□□□□ -1.02
CLK3-205ENST00000561673 CFAP77Q6ZQR2 320 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 LINC00346Q8IVM7 164 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 FITM2Q8N6M3 262 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 ZNF283Q8N7M2 679 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 ATG16L2Q8NAA4 619 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 SDR9C7Q8NEX9 313 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 OR4M2Q8NGB6 313 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 OR9Q2Q8NGE9 314 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 OR52E2Q8NGJ4 325 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 ITLN1Q8WWA0 313 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 APOBEC3DQ96AK3 386 aaPredicted RBP8.68□□□□□ -1.02
CLK3-205ENST00000561673 OR2V2Q96R30 315 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 CCT8L2Q96SF2 557 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 BTBD10Q9BSF8 475 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 CDADC1Q9BWV3 514 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 HDHD2Q9H0R4 259 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 FN3KQ9H479 309 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 EGLN3Q9H6Z9 239 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 ACTR3BQ9P1U1 418 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 IL19Q9UHD0 177 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms