RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 SNX18Q96RF0 628 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 PIMREGQ9BSJ6 248 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 HCAR1Q9BXC0 346 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 NARFLQ9H6Q4 476 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 DECR2Q9NUI1 292 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 MRPL22Q9NWU5 206 aaKnown RBP8.68□□□□□ -1.02
HERC1-212ENST00000561348 SLCO1C1Q9NYB5 712 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 TREM2Q9NZC2 230 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 STARD10Q9Y365 291 aa8.68□□□□□ -1.02
HERC1-212ENST00000561348 ARRDC5A6NEK1 342 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 OR6C6A6NF89 314 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 M0R129 80 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 LCATP04180 440 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 HMGN1P05114 100 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 FOSL1P15407 271 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 NAA10P41227 235 aaPredicted RBP8.67□□□□□ -1.02
HERC1-212ENST00000561348 MAGEB1P43366 347 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 ZNF81P51508 661 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 CRISP1P54107 249 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 DSCR9P59020 149 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 EIF2B1Q14232 305 aaKnown RBP8.67□□□□□ -1.02
HERC1-212ENST00000561348 HLXQ14774 488 aaPredicted RBP8.67□□□□□ -1.02
HERC1-212ENST00000561348 KCNMB1Q16558 191 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 MOGQ16653 247 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 SLC18B1Q6NT16 456 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 CD300LDQ6UXZ3 194 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 DCXRQ7Z4W1 244 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 BIVMQ86UB2 503 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 CPOQ8IVL8 374 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 BHLHE23Q8NDY6 225 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 KLF14Q8TD94 323 aaPredicted RBP8.67□□□□□ -1.02
HERC1-212ENST00000561348 NEU4Q8WWR8 484 aaPredicted RBP8.67□□□□□ -1.02
HERC1-212ENST00000561348 CMBLQ96DG6 245 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 COX4I2Q96KJ9 171 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 RAB3IPQ96QF0 476 aaPredicted RBP8.67□□□□□ -1.02
HERC1-212ENST00000561348 ATF6BQ99941 703 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 COPS4Q9BT78 406 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 WACQ9BTA9 647 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 RBM4Q9BWF3 364 aaKnown RBP8.67□□□□□ -1.02
HERC1-212ENST00000561348 HDHD2Q9H0R4 259 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 POFUT1Q9H488 388 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 RIBC2Q9H4K1 309 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 MSL2Q9HCI7 577 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 BRD7Q9NPI1 651 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 HINT3Q9NQE9 182 aaKnown RBP8.67□□□□□ -1.02
HERC1-212ENST00000561348 CMC2Q9NRP2 79 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.67□□□□□ -1.02
HERC1-212ENST00000561348 FBXO9Q9UK97 447 aaPredicted RBP8.67□□□□□ -1.02
HERC1-212ENST00000561348 COMMD3-BMI1R4GMX3 469 aa8.67□□□□□ -1.02
HERC1-212ENST00000561348 SURF4O15260 269 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 PPIHO43447 177 aaKnown RBP8.66□□□□□ -1.02
HERC1-212ENST00000561348 BAG2O95816 211 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 HPXP02790 462 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 MRPL3P09001 348 aaKnown RBP8.66□□□□□ -1.02
HERC1-212ENST00000561348 CSF3P09919 207 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 COX5BP10606 129 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 SLC2A1P11166 492 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 ZNF250P15622 560 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 IGFBP5P24593 272 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 COL8A2P25067 703 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 GSTT1P30711 240 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 GGT2P36268 569 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 EVX1P49640 407 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 ENTPD1P49961 510 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 PRKXP51817 358 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 TPTEP56180 551 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 PTGES3Q15185 160 aaKnown RBP8.66□□□□□ -1.02
HERC1-212ENST00000561348 ZNF362Q5T0B9 420 aaPredicted RBP8.66□□□□□ -1.02
HERC1-212ENST00000561348 CXXC5Q7LFL8 322 aaKnown RBP8.66□□□□□ -1.02
HERC1-212ENST00000561348 NAA40Q86UY6 237 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 ZNF283Q8N7M2 679 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 BBS1Q8NFJ9 593 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 OR5L1Q8NGL2 311 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 C10orf105Q8TEF2 133 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 SPTSSAQ969W0 71 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 NRBF2Q96F24 287 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 MARS2Q96GW9 593 aaKnown RBP8.66□□□□□ -1.02
HERC1-212ENST00000561348 MAP6Q96JE9 813 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 INTS14Q96SY0 518 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 DLL4Q9NR61 685 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 YAE1D1Q9NRH1 226 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 DNAJC27Q9NZQ0 273 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 H2AFY2Q9P0M6 372 aaPredicted RBP8.66□□□□□ -1.02
HERC1-212ENST00000561348 CYB5R1Q9UHQ9 305 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 OAZ3Q9UMX2 235 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 VPS13CQ709C8 3753 aa8.66□□□□□ -1.02
HERC1-212ENST00000561348 IGHV3-64DA0A0J9YX35 117 aa8.65□□□□□ -1.02
HERC1-212ENST00000561348 LOC390937A0A1W2PQ73 354 aa8.65□□□□□ -1.02
HERC1-212ENST00000561348 LRP5LA4QPB2 252 aa8.65□□□□□ -1.02
HERC1-212ENST00000561348 C17orf100A8MU93 164 aa8.65□□□□□ -1.02
HERC1-212ENST00000561348 TBX1O43435 398 aa8.65□□□□□ -1.02
HERC1-212ENST00000561348 SELENOFO60613 162 aa8.65□□□□□ -1.02
HERC1-212ENST00000561348 IGHV3-13P01766 116 aa8.65□□□□□ -1.02
HERC1-212ENST00000561348 ANXA2P07355 339 aaKnown RBP8.65□□□□□ -1.02
HERC1-212ENST00000561348 SLC25A16P16260 332 aa8.65□□□□□ -1.02
HERC1-212ENST00000561348 USF1P22415 310 aaPredicted RBP8.65□□□□□ -1.02
HERC1-212ENST00000561348 HSD11B1P28845 292 aa8.65□□□□□ -1.02
HERC1-212ENST00000561348 SLC25A1P53007 311 aa8.65□□□□□ -1.02
HERC1-212ENST00000561348 ACTR3P61158 418 aa8.65□□□□□ -1.02
HERC1-212ENST00000561348 PPP2R2BQ00005 443 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms