RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 SLC35F2Q8IXU6 374 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 YIPF7Q8N8F6 280 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 OR52H1Q8NGJ2 320 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 OR2T27Q8NH04 317 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 PERPQ96FX8 193 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 ZNF799Q96GE5 643 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 POM121L2Q96KW2 1035 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 ZNF582Q96NG8 517 aaPredicted RBP9.27□□□□□ -0.93
TPM1-229ENST00000561242 HIST1H2AAQ96QV6 131 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 SYT3Q9BQG1 590 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 NMNAT2Q9BZQ4 307 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 OPA3Q9H6K4 179 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 BRD7Q9NPI1 651 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 SCN3BQ9NY72 215 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 DNAJC27Q9NZQ0 273 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 CGGBP1Q9UFW8 167 aaPredicted RBP9.27□□□□□ -0.93
TPM1-229ENST00000561242 TMEFF2Q9UIK5 374 aaPredicted RBP9.27□□□□□ -0.93
TPM1-229ENST00000561242 RRP15Q9Y3B9 282 aaKnown RBP9.27□□□□□ -0.93
TPM1-229ENST00000561242 BOD1L1Q8NFC6 3051 aa9.27□□□□□ -0.93
TPM1-229ENST00000561242 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.26□□□□□ -0.93
TPM1-229ENST00000561242 H0YAE9 185 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 H3BSA7 217 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 XRCC2O43543 280 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 TP53P04637 393 aaPredicted RBP9.26□□□□□ -0.93
TPM1-229ENST00000561242 RPSAP08865 295 aaKnown RBP9.26□□□□□ -0.93
TPM1-229ENST00000561242 ZNF35P13682 527 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 PEX2P28328 305 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 CALCRP30988 508 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 POLR2IP36954 125 aaKnown RBP9.26□□□□□ -0.93
TPM1-229ENST00000561242 GNALP38405 381 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 CAPGP40121 348 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 CX3CR1P49238 355 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 DSCR9P59020 149 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 SNRPGP62308 76 aaKnown RBP9.26□□□□□ -0.93
TPM1-229ENST00000561242 NKX6-1P78426 367 aaPredicted RBP9.26□□□□□ -0.93
TPM1-229ENST00000561242 SPOCK1Q08629 439 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 OCLNQ16625 522 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 GFOD2Q3B7J2 385 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 CCDC92Q53HC0 331 aaPredicted RBP9.26□□□□□ -0.93
TPM1-229ENST00000561242 FAM209AQ5JX71 171 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 SHEQ5VZ18 495 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 DEGS2Q6QHC5 323 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 CLEC2AQ6UVW9 174 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 PGAP1Q75T13 922 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 RHOUQ7L0Q8 258 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 KCTD20Q7Z5Y7 419 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 PEG10Q86TG7 708 aaKnown RBP9.26□□□□□ -0.93
TPM1-229ENST00000561242 OTOSQ8NHW6 89 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 FGFBP3Q8TAT2 258 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 NEU4Q8WWR8 484 aaPredicted RBP9.26□□□□□ -0.93
TPM1-229ENST00000561242 NEUROG1Q92886 237 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 MRPL24Q96A35 216 aaKnown RBP9.26□□□□□ -0.93
TPM1-229ENST00000561242 RNFT2Q96EX2 444 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 DIRC2Q96SL1 478 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 SLC29A1Q99808 456 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 RHNO1Q9BSD3 238 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 CACNG6Q9BXT2 260 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 RASSF4Q9H2L5 321 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 PTTG3PQ9NZH4 202 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 LHFPL6Q9Y693 200 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 HSPE1-MOB4S4R3N1 261 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 DOCK7Q96N67 2140 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 ARHGAP21Q5T5U3 1957 aa9.26□□□□□ -0.93
TPM1-229ENST00000561242 ANKRD30BLA7E2S9 258 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 H0YJX3 145 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 CASQ2O14958 399 aaPredicted RBP9.25□□□□□ -0.93
TPM1-229ENST00000561242 SLC16A6O15403 523 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 SELENOFO60613 162 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 MTRF1O75570 445 aaKnown RBP9.25□□□□□ -0.93
TPM1-229ENST00000561242 HEXAP06865 529 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 ADRA2AP08913 450 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 CSF3P09919 207 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 ACTA2P62736 377 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 ACTG2P63267 376 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 HGFACQ04756 655 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 EGR3Q06889 387 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 RIPK1Q13546 671 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 PCGF3Q3KNV8 242 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 ZNF362Q5T0B9 420 aaPredicted RBP9.25□□□□□ -0.93
TPM1-229ENST00000561242 SPATA46Q5T0L3 261 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 OGFRL1Q5TC84 451 aaPredicted RBP9.25□□□□□ -0.93
TPM1-229ENST00000561242 OTPQ5XKR4 325 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 ZNF322Q6U7Q0 402 aaPredicted RBP9.25□□□□□ -0.93
TPM1-229ENST00000561242 TMPRSS11AQ6ZMR5 421 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 THAP5Q7Z6K1 395 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 STX19Q8N4C7 294 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 ZNF540Q8NDQ6 660 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 SLC25A40Q8TBP6 338 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 CMBLQ96DG6 245 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 TBX5Q99593 518 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 ABHD6Q9BV23 337 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 SLC22A4Q9H015 551 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 NEK6Q9HC98 313 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 MYOZ1Q9NP98 299 aaPredicted RBP9.25□□□□□ -0.93
TPM1-229ENST00000561242 MRPL22Q9NWU5 206 aaKnown RBP9.25□□□□□ -0.93
TPM1-229ENST00000561242 HAO2Q9NYQ3 351 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 ZNF391Q9UJN7 358 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 FZR1Q9UM11 496 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 KALRNO60229 2985 aa9.25□□□□□ -0.93
TPM1-229ENST00000561242 NCOA6Q14686 2063 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms