RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 PNLIPRP3Q17RR3 467 aa14.8□□□□□ -0.04
TPM1-228ENST00000560975 PMM1Q92871 262 aa14.8□□□□□ -0.04
TPM1-228ENST00000560975 TM4SF19Q96DZ7 209 aa14.8□□□□□ -0.04
TPM1-228ENST00000560975 OR8B4Q96RC9 309 aa14.8□□□□□ -0.04
TPM1-228ENST00000560975 TCEAL7Q9BRU2 100 aa14.8□□□□□ -0.04
TPM1-228ENST00000560975 GSKIPQ9P0R6 139 aa14.8□□□□□ -0.04
TPM1-228ENST00000560975 SERINC4A6NH21 518 aa14.8□□□□□ -0.04
TPM1-228ENST00000560975 H0YGG7 62 aa14.8□□□□□ -0.04
TPM1-228ENST00000560975 OIP5O43482 229 aa14.8□□□□□ -0.04
TPM1-228ENST00000560975 GNB3P16520 340 aa14.8□□□□□ -0.04
TPM1-228ENST00000560975 ZNF10P21506 573 aaPredicted RBP14.8□□□□□ -0.04
TPM1-228ENST00000560975 S100A10P60903 97 aa14.8□□□□□ -0.04
TPM1-228ENST00000560975 ARF3P61204 181 aaPredicted RBP14.8□□□□□ -0.04
TPM1-228ENST00000560975 AWAT1Q58HT5 328 aa14.8□□□□□ -0.04
TPM1-228ENST00000560975 OR2B11Q5JQS5 317 aa14.8□□□□□ -0.04
TPM1-228ENST00000560975 NPSR1Q6W5P4 371 aa14.8□□□□□ -0.04
TPM1-228ENST00000560975 WDSUB1Q8N9V3 476 aa14.8□□□□□ -0.04
TPM1-228ENST00000560975 ANKRD9Q96BM1 317 aaPredicted RBP14.8□□□□□ -0.04
TPM1-228ENST00000560975 CTHRC1Q96CG8 243 aa14.8□□□□□ -0.04
TPM1-228ENST00000560975 KTI12Q96EK9 354 aaPredicted RBP14.8□□□□□ -0.04
TPM1-228ENST00000560975 SMIM8Q96KF7 97 aa14.8□□□□□ -0.04
TPM1-228ENST00000560975 HDAC8Q9BY41 377 aa14.8□□□□□ -0.04
TPM1-228ENST00000560975 WIF1Q9Y5W5 379 aa14.8□□□□□ -0.04
TPM1-228ENST00000560975 A0A1W2PP55 124 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 GATCO43716 136 aaKnown RBP14.79□□□□□ -0.04
TPM1-228ENST00000560975 OR6A2O95222 327 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 MT-ND4LP03901 98 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 OR8U9P0C7N5 309 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 PRF1P14222 555 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 CFPP27918 469 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 TOMM20Q15388 145 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 PLPP4Q5VZY2 271 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 FIGLAQ6QHK4 219 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 PPP1R3BQ86XI6 285 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 OR8U1Q8NH10 309 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 TCTEX1D2Q8WW35 142 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 HHIPL1Q96JK4 782 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 PFDN5Q99471 154 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 MMP25Q9NPA2 562 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 SLC2A8Q9NY64 477 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 TRBV6-7A0A0A0MS04 114 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 SOX1O00570 391 aaPredicted RBP14.79□□□□□ -0.04
TPM1-228ENST00000560975 ARG1P05089 322 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 INHAP05111 366 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 CD5P06127 495 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 ACKR3P25106 362 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 EIF2S3P41091 472 aaKnown RBP14.79□□□□□ -0.04
TPM1-228ENST00000560975 EEF1A1P5Q5VTE0 462 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 AGBL4Q5VU57 503 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 FAM24BQ8N5W8 94 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 OR13C3Q8NGS6 347 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 RAB7BQ96AH8 199 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 MRPL38Q96DV4 380 aaKnown RBP14.79□□□□□ -0.04
TPM1-228ENST00000560975 NMES1Q9C002 83 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 CHRDQ9H2X0 955 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 TAF9BQ9HBM6 251 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 GDF2Q9UK05 429 aaPredicted RBP14.79□□□□□ -0.04
TPM1-228ENST00000560975 C7orf77A4D0Y5 90 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 FCGR3AP08637 254 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 NPY4RP50391 375 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 ZNF260Q3ZCT1 412 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 TMEM244Q5VVB8 128 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 TMEM184AQ6ZMB5 413 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 FRMD1Q8N878 549 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 AQP3Q92482 292 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 SAT2Q96F10 170 aaPredicted RBP14.79□□□□□ -0.04
TPM1-228ENST00000560975 KLHDC3Q9BQ90 382 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 KIR3DX1Q9H7L2 352 aa14.79□□□□□ -0.04
TPM1-228ENST00000560975 DBX1A6NMT0 343 aa14.78□□□□□ -0.04
TPM1-228ENST00000560975 PRAMEF26H0Y7S4 382 aa14.78□□□□□ -0.04
TPM1-228ENST00000560975 MFNGO00587 321 aa14.78□□□□□ -0.04
TPM1-228ENST00000560975 FBP1P09467 338 aa14.78□□□□□ -0.04
TPM1-228ENST00000560975 FOSL1P15407 271 aa14.78□□□□□ -0.04
TPM1-228ENST00000560975 CX3CR1P49238 355 aa14.78□□□□□ -0.04
TPM1-228ENST00000560975 RAB32Q13637 225 aa14.78□□□□□ -0.04
TPM1-228ENST00000560975 ZNF141Q15928 474 aa14.78□□□□□ -0.04
TPM1-228ENST00000560975 CBLN3Q6UW01 205 aa14.78□□□□□ -0.04
TPM1-228ENST00000560975 Q6ZRG5 221 aa14.78□□□□□ -0.04
TPM1-228ENST00000560975 RERGQ96A58 199 aaPredicted RBP14.78□□□□□ -0.04
TPM1-228ENST00000560975 CYYR1Q96J86 154 aa14.78□□□□□ -0.04
TPM1-228ENST00000560975 FGF22Q9HCT0 170 aa14.78□□□□□ -0.04
TPM1-228ENST00000560975 LYRM4Q9HD34 91 aa14.78□□□□□ -0.04
TPM1-228ENST00000560975 K7EQS6 105 aa14.78□□□□□ -0.04
TPM1-228ENST00000560975 RAB27BO00194 218 aa14.78□□□□□ -0.04
TPM1-228ENST00000560975 APBB3O95704 486 aa14.78□□□□□ -0.04
TPM1-228ENST00000560975 EGR4Q05215 589 aa14.78□□□□□ -0.04
TPM1-228ENST00000560975 PDGFRLQ15198 375 aa14.78□□□□□ -0.04
TPM1-228ENST00000560975 ZNF679Q8IYX0 411 aa14.78□□□□□ -0.04
TPM1-228ENST00000560975 CA13Q8N1Q1 262 aa14.78□□□□□ -0.04
TPM1-228ENST00000560975 OR2I1PQ8NGU4 316 aa14.78□□□□□ -0.04
TPM1-228ENST00000560975 CCL4L1Q8NHW4 92 aa14.78□□□□□ -0.04
TPM1-228ENST00000560975 ZNF524Q96C55 264 aa14.78□□□□□ -0.04
TPM1-228ENST00000560975 METTL8Q9H825 291 aaKnown RBP14.78□□□□□ -0.04
TPM1-228ENST00000560975 GDE1Q9NZC3 331 aa14.78□□□□□ -0.04
TPM1-228ENST00000560975 METTL21EPA6NDL7 271 aa14.77□□□□□ -0.04
TPM1-228ENST00000560975 TIMP1P01033 207 aa14.77□□□□□ -0.04
TPM1-228ENST00000560975 RAB5AP20339 215 aa14.77□□□□□ -0.04
TPM1-228ENST00000560975 S1PR1P21453 382 aa14.77□□□□□ -0.04
TPM1-228ENST00000560975 LAP3P28838 519 aa14.77□□□□□ -0.04
TPM1-228ENST00000560975 CYCSP99999 105 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms