RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 BEX4Q9NWD9 120 aaPredicted RBP13.34□□□□□ -0.27
LYSMD2-204ENST00000560491 H2AFY2Q9P0M6 372 aaPredicted RBP13.34□□□□□ -0.27
LYSMD2-204ENST00000560491 MYEF2Q9P2K5 600 aaKnown RBP13.34□□□□□ -0.27
LYSMD2-204ENST00000560491 AASSQ9UDR5 926 aa13.34□□□□□ -0.27
LYSMD2-204ENST00000560491 ATPIF1Q9UII2 106 aa13.34□□□□□ -0.27
LYSMD2-204ENST00000560491 METRNQ9UJH8 293 aa13.34□□□□□ -0.27
LYSMD2-204ENST00000560491 KLHDC2Q9Y2U9 406 aa13.34□□□□□ -0.27
LYSMD2-204ENST00000560491 GRIP1Q9Y3R0 1128 aa13.34□□□□□ -0.27
LYSMD2-204ENST00000560491 CMAHPQ9Y471 501 aa13.34□□□□□ -0.27
LYSMD2-204ENST00000560491 GMPPBQ9Y5P6 360 aa13.34□□□□□ -0.27
LYSMD2-204ENST00000560491 ARFGEF3Q5TH69 2177 aa13.34□□□□□ -0.27
LYSMD2-204ENST00000560491 LOC100130705A0A1B0GUX0 176 aa13.33□□□□□ -0.28
LYSMD2-204ENST00000560491 TMEM129A0AVI4 362 aa13.33□□□□□ -0.28
LYSMD2-204ENST00000560491 ICMTO60725 284 aa13.33□□□□□ -0.28
LYSMD2-204ENST00000560491 HCCSP53701 268 aa13.33□□□□□ -0.28
LYSMD2-204ENST00000560491 PPP1CBP62140 327 aa13.33□□□□□ -0.28
LYSMD2-204ENST00000560491 SLC34A1Q06495 639 aa13.33□□□□□ -0.28
LYSMD2-204ENST00000560491 EFNB3Q15768 340 aa13.33□□□□□ -0.28
LYSMD2-204ENST00000560491 SWI5Q1ZZU3 235 aa13.33□□□□□ -0.28
LYSMD2-204ENST00000560491 KRTAP27-1Q3LI81 207 aa13.33□□□□□ -0.28
LYSMD2-204ENST00000560491 MEPCEQ7L2J0 689 aaKnown RBP13.33□□□□□ -0.28
LYSMD2-204ENST00000560491 GID4Q8IVV7 300 aa13.33□□□□□ -0.28
LYSMD2-204ENST00000560491 PACRGLQ8N7B6 248 aa13.33□□□□□ -0.28
LYSMD2-204ENST00000560491 SLC25A40Q8TBP6 338 aa13.33□□□□□ -0.28
LYSMD2-204ENST00000560491 ZNF582Q96NG8 517 aaPredicted RBP13.33□□□□□ -0.28
LYSMD2-204ENST00000560491 ABHD6Q9BV23 337 aa13.33□□□□□ -0.28
LYSMD2-204ENST00000560491 PLK3Q9H4B4 646 aa13.33□□□□□ -0.28
LYSMD2-204ENST00000560491 RNPEPL1Q9HAU8 725 aa13.33□□□□□ -0.28
LYSMD2-204ENST00000560491 CENPMQ9NSP4 180 aa13.33□□□□□ -0.28
LYSMD2-204ENST00000560491 DDX28Q9NUL7 540 aaKnown RBP13.33□□□□□ -0.28
LYSMD2-204ENST00000560491 FAM118AQ9NWS6 357 aa13.33□□□□□ -0.28
LYSMD2-204ENST00000560491 USF3Q68DE3 2245 aa13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 VPS13CQ709C8 3753 aa13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 SLC22A31A6NKX4 558 aa13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 B9A039 149 aa13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 CLPTM1O96005 669 aa13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 ACSM4P0C7M7 580 aa13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 PTH2RP49190 550 aa13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 SNRPD2P62316 118 aaKnown RBP13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 ECH1Q13011 328 aa13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 GGTLC2Q14390 218 aa13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 TMEM255AQ5JRV8 349 aa13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 SHFQ7M4L6 423 aa13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 SLC16A9Q7RTY1 509 aa13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 NAA40Q86UY6 237 aa13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 OTOSQ8NHW6 89 aa13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 NRG4Q8WWG1 115 aa13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 RDH12Q96NR8 316 aa13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 CNN2Q99439 309 aaKnown RBP13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 FOXC2Q99958 501 aa13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 COPS4Q9BT78 406 aa13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 OR2J1Q9GZK6 312 aa13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 ELOVL3Q9HB03 270 aa13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 C8orf4Q9NR00 106 aa13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 ZNF701Q9NV72 531 aaPredicted RBP13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 DUSP13Q9UII6 198 aa13.32□□□□□ -0.28
LYSMD2-204ENST00000560491 VSTM5A8MXK1 200 aa13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 ZNF878C9JN71 531 aa13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 M0R135 149 aa13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 NDUFS7O75251 213 aa13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 LYNP07948 512 aa13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 ANOS1P23352 680 aa13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 MPV17P39210 176 aa13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 MAD2L1BPQ15013 274 aaPredicted RBP13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 TAF13Q15543 124 aa13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 ALKBH6Q3KRA9 238 aa13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 ARL9Q6T311 187 aa13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 ENTHD1Q8IYW4 607 aa13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 ZNF555Q8NEP9 628 aa13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 SYNPRQ8TBG9 265 aa13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 THEM6Q8WUY1 208 aa13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 RNF133Q8WVZ7 376 aa13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 TRUB1Q8WWH5 349 aaKnown RBP13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 CYGBQ8WWM9 190 aa13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 IPCEF1Q8WWN9 437 aaPredicted RBP13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 ZNF799Q96GE5 643 aa13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 MARS2Q96GW9 593 aaKnown RBP13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 DCLRE1CQ96SD1 692 aaKnown RBP13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 DOK1Q99704 481 aa13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 TTTY10Q9BZA0 68 aa13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 ADGRL4Q9HBW9 690 aa13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 TBCCD1Q9NVR7 557 aa13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 STARD10Q9Y365 291 aa13.31□□□□□ -0.28
LYSMD2-204ENST00000560491 CCDC168Q8NDH2 2452 aa13.3□□□□□ -0.28
LYSMD2-204ENST00000560491 PRRC2AP48634 2157 aaKnown RBP13.3□□□□□ -0.28
LYSMD2-204ENST00000560491 A0A1W2PPW3 197 aa13.3□□□□□ -0.28
LYSMD2-204ENST00000560491 SLC16A6O15403 523 aa13.3□□□□□ -0.28
LYSMD2-204ENST00000560491 ENTPD6O75354 484 aa13.3□□□□□ -0.28
LYSMD2-204ENST00000560491 APOL3O95236 402 aa13.3□□□□□ -0.28
LYSMD2-204ENST00000560491 CLIC3O95833 236 aa13.3□□□□□ -0.28
LYSMD2-204ENST00000560491 ZNF250P15622 560 aa13.3□□□□□ -0.28
LYSMD2-204ENST00000560491 PAX1P15863 534 aa13.3□□□□□ -0.28
LYSMD2-204ENST00000560491 GABRB1P18505 474 aa13.3□□□□□ -0.28
LYSMD2-204ENST00000560491 ALOX5APP20292 161 aa13.3□□□□□ -0.28
LYSMD2-204ENST00000560491 HTR1FP30939 366 aa13.3□□□□□ -0.28
LYSMD2-204ENST00000560491 ALDH3B1P43353 468 aa13.3□□□□□ -0.28
LYSMD2-204ENST00000560491 PRKXP51817 358 aa13.3□□□□□ -0.28
LYSMD2-204ENST00000560491 ATP5J2P56134 94 aa13.3□□□□□ -0.28
LYSMD2-204ENST00000560491 KLF3P57682 345 aaPredicted RBP13.3□□□□□ -0.28
LYSMD2-204ENST00000560491 SNRPGP62308 76 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms