RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 ETFDHQ16134 617 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 KCNMB1Q16558 191 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 SLC36A2Q495M3 483 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 LINC01590Q5TEZ4 76 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 TSPO2Q5TGU0 170 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 FAM27BQ5VT28 67 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 KLHL24Q6TFL4 600 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 ZNF322Q6U7Q0 402 aaPredicted RBP10.3□□□□□ -0.76
LDLR-212ENST00000560467 ZNF813Q6ZN06 617 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 DPY19L4Q7Z388 723 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 NUFIP2Q7Z417 695 aaKnown RBP10.3□□□□□ -0.76
LDLR-212ENST00000560467 KRT77Q7Z794 578 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 TIGD4Q8IY51 512 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 ALDH16A1Q8IZ83 802 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 NANOGP1Q8N7R0 232 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 OTOSQ8NHW6 89 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 C11orf40Q8WZ69 217 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 NMD3Q96D46 503 aaKnown RBP10.3□□□□□ -0.76
LDLR-212ENST00000560467 FOXN4Q96NZ1 517 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 ALKBH3Q96Q83 286 aaPredicted RBP10.3□□□□□ -0.76
LDLR-212ENST00000560467 FOXB1Q99853 325 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 C1orf198Q9H425 327 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 MARCH7Q9H992 704 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 TRIM36Q9NQ86 728 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 POLE4Q9NR33 117 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 PLSCR4Q9NRQ2 329 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 SLC7A10Q9NS82 523 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 BABAM2Q9NXR7 383 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 ING1Q9UK53 422 aaPredicted RBP10.3□□□□□ -0.76
LDLR-212ENST00000560467 METTL15A6NJ78 407 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 C16orf97H3BN30 126 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 ZNF254O75437 659 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 THBDP07204 575 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 H2BFMP0C1H6 154 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 JUNBP17275 347 aaPredicted RBP10.29□□□□□ -0.76
LDLR-212ENST00000560467 CDAP32320 146 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 MAP2K4P45985 399 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 ETV1P50549 477 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 UBE2NP61088 152 aaKnown RBP10.29□□□□□ -0.76
LDLR-212ENST00000560467 ECH1Q13011 328 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 AQP6Q13520 282 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 TIGD6Q17RP2 521 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 OR7E24Q6IFN5 339 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 TMEM53Q6P2H8 277 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 DEGS2Q6QHC5 323 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 SLC16A14Q7RTX9 510 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 SYT9Q86SS6 491 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 SYS1Q8N2H4 156 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 SLC22A24Q8N4F4 322 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 YIPF7Q8N8F6 280 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 ZNF610Q8N9Z0 462 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 IGFBPL1Q8WX77 278 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 COG8Q96MW5 612 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 RHNO1Q9BSD3 238 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 NIPAL2Q9H841 368 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 RNF121Q9H920 327 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 MOV10Q9HCE1 1003 aaKnown RBP10.29□□□□□ -0.76
LDLR-212ENST00000560467 CENPMQ9NSP4 180 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 TMEM38BQ9NVV0 291 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 ELOVL5Q9NYP7 299 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 MALT1Q9UDY8 824 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 GNG8Q9UK08 70 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 TIMM10BQ9Y5J6 103 aa10.29□□□□□ -0.76
LDLR-212ENST00000560467 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.28□□□□□ -0.76
LDLR-212ENST00000560467 CCDC160A6NGH7 325 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 J3QRE1 110 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 CRLF1O75462 422 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 MPZL1O95297 269 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 TFP02787 698 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 CST2P09228 141 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 LIMS3P0CW19 117 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 LIMS4P0CW20 117 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 GAAP10253 952 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 CD8BP10966 210 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 HOXB1P14653 301 aaPredicted RBP10.28□□□□□ -0.76
LDLR-212ENST00000560467 ALOX5APP20292 161 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 PAX7P23759 505 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 HSD11B1P28845 292 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 ARR3P36575 388 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 RIDAP52758 137 aaKnown RBP10.28□□□□□ -0.76
LDLR-212ENST00000560467 ARF1P84077 181 aaKnown RBP10.28□□□□□ -0.76
LDLR-212ENST00000560467 PLP2Q04941 152 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 TIMM50Q3ZCQ8 353 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 ARMCX4Q5H9R4 360 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 UBE2UQ5VVX9 321 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 ANKRD16Q6P6B7 361 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 ZNF704Q6ZNC4 412 aaPredicted RBP10.28□□□□□ -0.76
LDLR-212ENST00000560467 Q6ZT83 130 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 RHOUQ7L0Q8 258 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.28□□□□□ -0.76
LDLR-212ENST00000560467 DCXRQ7Z4W1 244 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 LRRC18Q8N456 261 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 MAPK1IP1LQ8NDC0 245 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 ZNRF4Q8WWF5 429 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 GATAD2BQ8WXI9 593 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 UFD1Q92890 307 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 MGLLQ99685 303 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 USB1Q9BQ65 265 aaKnown RBP10.28□□□□□ -0.76
LDLR-212ENST00000560467 HDHD5Q9BXW7 423 aa10.28□□□□□ -0.76
LDLR-212ENST00000560467 SP140LQ9H930 580 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms