RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 MND1Q9BWT6 205 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 CDCA4Q9BXL8 241 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 MS4A5Q9H3V2 200 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 FN3KQ9H479 309 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 MED29Q9NX70 200 aa11.68□□□□□ -0.54
SMAD3-214ENST00000560402 LRP5LA4QPB2 252 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 RIIAD1A6NNX1 92 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 H3BMQ9 156 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 KPNA4O00629 521 aaPredicted RBP11.67□□□□□ -0.54
SMAD3-214ENST00000560402 PLPP3O14495 311 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 MYL12BO14950 172 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 INMTO95050 263 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 LYPD3O95274 346 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 IGF2P01344 180 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 THY1P04216 161 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 IGFBP1P08833 259 aaPredicted RBP11.67□□□□□ -0.54
SMAD3-214ENST00000560402 ADRA2AP08913 450 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 DBTP11182 482 aaKnown RBP11.67□□□□□ -0.54
SMAD3-214ENST00000560402 ZNF35P13682 527 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 HLA-DOBP13765 273 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 B4GALT1P15291 398 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 MAP2K4P45985 399 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 CSNK1A1P48729 337 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 DVL1P1P54792 670 aaPredicted RBP11.67□□□□□ -0.54
SMAD3-214ENST00000560402 GALK2Q01415 458 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 ZNF91Q05481 1191 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 LSAMPQ13449 338 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 TIGD6Q17RP2 521 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 ANKDD1AQ495B1 522 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 CLEC12AQ5QGZ9 265 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 PHYHD1Q5SRE7 291 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 RNLSQ5VYX0 342 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 OAFQ86UD1 273 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 SGCDQ92629 289 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 COG8Q96MW5 612 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 ZNF75AQ96N20 296 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 MOGAT1Q96PD6 335 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 SIGLEC11Q96RL6 698 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 SOX7Q9BT81 388 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 ZNF426Q9BUY5 554 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 EMC6Q9BV81 110 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 FUNDC2Q9BWH2 189 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 MRPL37Q9BZE1 423 aaKnown RBP11.67□□□□□ -0.54
SMAD3-214ENST00000560402 OR52D1Q9H346 318 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 ENPP5Q9UJA9 477 aa11.67□□□□□ -0.54
SMAD3-214ENST00000560402 ZNF346Q9UL40 294 aaKnown RBP11.67□□□□□ -0.54
SMAD3-214ENST00000560402 M0R129 80 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 TCF21O43680 179 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 PRKYO43930 277 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 BCL10O95999 233 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 TFP02787 698 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 ACHEP22303 614 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 SLC15A1P46059 708 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 SERPINB10P48595 397 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 GP2P55259 537 aaKnown RBP11.66□□□□□ -0.54
SMAD3-214ENST00000560402 MRPS11P82912 194 aaKnown RBP11.66□□□□□ -0.54
SMAD3-214ENST00000560402 RAB40BQ12829 278 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 TMED1Q13445 227 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 CAMK2DQ13557 499 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 ACSM5Q6NUN0 579 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 NHLRC1Q6VVB1 395 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 DPPA2Q7Z7J5 298 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 C10orf53Q8N6V4 93 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 OR6X1Q8NH79 312 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 PFN4Q8NHR9 129 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 MS4A3Q96HJ5 214 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 SAMD8Q96LT4 415 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 ZNF582Q96NG8 517 aaPredicted RBP11.66□□□□□ -0.54
SMAD3-214ENST00000560402 SNX18Q96RF0 628 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 GPA33Q99795 319 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 IFT27Q9BW83 186 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 PLA2G12AQ9BZM1 189 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 TPK1Q9H3S4 243 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 C1orf198Q9H425 327 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 AMBNQ9NP70 447 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 ZNF224Q9NZL3 707 aa11.66□□□□□ -0.54
SMAD3-214ENST00000560402 EXOSC1Q9Y3B2 195 aaKnown RBP11.66□□□□□ -0.54
SMAD3-214ENST00000560402 SLC22A23A1A5C7 686 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 B4DSR2 109 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 SURF4O15260 269 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 GABARAPO95166 117 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 NDUFB2O95178 105 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 OR6A2O95222 327 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 ADORA3P0DMS8 318 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 ZNF3P17036 446 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 AHCYP23526 432 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 NOS3P29474 1203 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 IL2RGP31785 369 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 ATP6V1E1P36543 226 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 SRP14P37108 136 aaKnown RBP11.65□□□□□ -0.54
SMAD3-214ENST00000560402 GPR6P46095 362 aaPredicted RBP11.65□□□□□ -0.54
SMAD3-214ENST00000560402 MTNR1AP48039 350 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 RAB1AP62820 205 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 ZP4Q12836 540 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 SCGB2A2Q13296 93 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 IRF3Q14653 427 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 NRN1LQ496H8 165 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 NXNL2Q5VZ03 156 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 LINC00114Q6XXX2 140 aa11.65□□□□□ -0.54
SMAD3-214ENST00000560402 GLCCI1Q86VQ1 547 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms