RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 RSPO1Q2MKA7 263 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 C1orf146Q5VVC0 180 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 MBNL2Q5VZF2 373 aaKnown RBP12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 TMEM236Q5W0B7 351 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 ACSM5Q6NUN0 579 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 ARL9Q6T311 187 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 CD300LDQ6UXZ3 194 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 NAA40Q86UY6 237 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 OR2AJ1Q8NGZ0 328 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 OR2T4Q8NH00 348 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 CMBLQ96DG6 245 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 MAP6Q96JE9 813 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 PITX2Q99697 317 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 SOX7Q9BT81 388 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 NARFLQ9H6Q4 476 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 YY1AP1Q9H869 796 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 PNRC2Q9NPJ4 139 aaKnown RBP12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 TBCCD1Q9NVR7 557 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 TREM2Q9NZC2 230 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 KLHL21Q9UJP4 597 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 BAIAP2Q9UQB8 552 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 CACNG2Q9Y698 323 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 ABCA1O95477 2261 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 TANC2Q9HCD6 1990 aa12.65□□□□□ -0.38
RABGGTA-211ENST00000559850 ABCA2Q9BZC7 2435 aa12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 RIIAD1A6NNX1 92 aa12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 TIMM8AO60220 97 aaPredicted RBP12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 IGHV1-46P01743 117 aa12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 SPARCP09486 303 aa12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 SPI1P17947 270 aa12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 GIFP27352 417 aa12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 GRK5P34947 590 aa12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 PPP2R2BQ00005 443 aa12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 RIN1Q13671 783 aa12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 UNQ6126/PRO20091Q6UXV3 157 aa12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 SPATC1Q76KD6 591 aa12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 ATG16L2Q8NAA4 619 aa12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 OR10S1Q8NGN2 331 aa12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 OR6K6Q8NGW6 343 aa12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 RDH5Q92781 318 aa12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 UTP4Q969X6 686 aaKnown RBP12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 COQ7Q99807 217 aa12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 NMNAT2Q9BZQ4 307 aa12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 HDHD2Q9H0R4 259 aa12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 ZNF275Q9NSD4 429 aaPredicted RBP12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 CYB5R1Q9UHQ9 305 aa12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 GPR160Q9UJ42 338 aa12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 COMMD3-BMI1R4GMX3 469 aa12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 NIPBLQ6KC79 2804 aaeCLIP12.64□□□□□ -0.39
RABGGTA-211ENST00000559850 ZFHX3Q15911 3703 aa12.63□□□□□ -0.39
RABGGTA-211ENST00000559850 PLSCR5A0PG75 271 aa12.63□□□□□ -0.39
RABGGTA-211ENST00000559850 F5H5K5 113 aa12.63□□□□□ -0.39
RABGGTA-211ENST00000559850 WNT9BO14905 357 aa12.63□□□□□ -0.39
RABGGTA-211ENST00000559850 LILRA1O75019 489 aa12.63□□□□□ -0.39
RABGGTA-211ENST00000559850 IFNGP01579 166 aa12.63□□□□□ -0.39
RABGGTA-211ENST00000559850 OSMP13725 252 aa12.63□□□□□ -0.39
RABGGTA-211ENST00000559850 ZNF23P17027 643 aa12.63□□□□□ -0.39
RABGGTA-211ENST00000559850 ZNF3P17036 446 aa12.63□□□□□ -0.39
RABGGTA-211ENST00000559850 ANOS1P23352 680 aa12.63□□□□□ -0.39
RABGGTA-211ENST00000559850 SLC25A1P53007 311 aa12.63□□□□□ -0.39
RABGGTA-211ENST00000559850 SHQ1Q6PI26 577 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-211ENST00000559850 USP51Q70EK9 711 aa12.63□□□□□ -0.39
RABGGTA-211ENST00000559850 OR5AS1Q8N127 324 aa12.63□□□□□ -0.39
RABGGTA-211ENST00000559850 ZNF556Q9HAH1 456 aa12.63□□□□□ -0.39
RABGGTA-211ENST00000559850 CMC2Q9NRP2 79 aa12.63□□□□□ -0.39
RABGGTA-211ENST00000559850 PURGQ9UJV8 347 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-211ENST00000559850 PPIHO43447 177 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 MITFO75030 526 aaPredicted RBP12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 DEAF1O75398 565 aaPredicted RBP12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 RP2O75695 350 aa12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 MT-ND5P03915 603 aa12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 ACSM4P0C7M7 580 aa12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 HOXB6P17509 224 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 FMO3P31513 532 aa12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 GPR6P46095 362 aaPredicted RBP12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 DAPP51397 102 aa12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 MOGQ16653 247 aa12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 KRTAP27-1Q3LI81 207 aa12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 C6orf52Q5T4I8 152 aa12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 AVPI1Q5T686 147 aa12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 LINC01590Q5TEZ4 76 aa12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 SLC27A4Q6P1M0 643 aa12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 PLBD1Q6P4A8 553 aa12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 Q6ZR03 302 aa12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 DCXRQ7Z4W1 244 aa12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 AMIGO2Q86SJ2 522 aa12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 DCLRE1CQ96SD1 692 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 ATF6BQ99941 703 aa12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 OR51V1Q9H2C8 321 aa12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 CHODLQ9H9P2 273 aa12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 DECR2Q9NUI1 292 aa12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 KIF17Q9P2E2 1029 aa12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 ANK3Q12955 4377 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 MALRD1Q5VYJ5 2156 aa12.62□□□□□ -0.39
RABGGTA-211ENST00000559850 IGHV1-69-2A0A0G2JMI3 117 aa12.61□□□□□ -0.39
RABGGTA-211ENST00000559850 C5orf63A6NC05 138 aa12.61□□□□□ -0.39
RABGGTA-211ENST00000559850 A8MV72 311 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-211ENST00000559850 ZNF593O00488 134 aaPredicted RBP12.61□□□□□ -0.39
RABGGTA-211ENST00000559850 ANXA8P13928 327 aa12.61□□□□□ -0.39
RABGGTA-211ENST00000559850 ACHEP22303 614 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms