RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 ASB17Q8WXJ9 295 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 HINT3Q9NQE9 182 aaKnown RBP9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 PROCRQ9UNN8 238 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 TANC1Q9C0D5 1861 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 FAM230AA0A1W2PPH8 454 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 SDHAP31040 664 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 RPS27P42677 84 aaKnown RBP9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 AGFG1P52594 562 aaKnown RBP9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 TOMM34Q15785 309 aaPredicted RBP9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 ZNF141Q15928 474 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 ATP1A1-AS1Q5TC04 95 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 ESPNLQ6ZVH7 1005 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 CISD2Q8N5K1 135 aaKnown RBP9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 OR5T2Q8NGG2 359 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 SCARB1Q8WTV0 552 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 TCTEX1D2Q8WW35 142 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 TEAD3Q99594 435 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 ARHGDIGQ99819 225 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 SCNM1Q9BWG6 230 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 WDR76Q9H967 626 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 OBP2BQ9NPH6 170 aa9.6□□□□□ -0.87
CARMIL3-202ENST00000559694 MEGF11A6BM72 1044 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 LGALS8O00214 317 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 SNAPINO95295 136 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 ZNF35P13682 527 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 SRD5A2P31213 254 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 IDH3GP51553 393 aaPredicted RBP9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 ZNF616Q08AN1 781 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 COL19A1Q14993 1142 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 DCXRQ7Z4W1 244 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 SLC51BQ86UW2 128 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 C10orf111Q8N326 155 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 MFSD8Q8NHS3 518 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 ZNF721Q8TF20 911 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 APH1BQ8WW43 257 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 CPNE4Q96A23 557 aaPredicted RBP9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 LANCL2Q9NS86 450 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 A0A0B4J2E0 115 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 TEX13DA0A0J9YY54 714 aaPredicted RBP9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 A0A1B0GX12 115 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 OR2M5A3KFT3 312 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 CSF1P09603 554 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 RHEBQ15382 184 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 RSU1Q15404 277 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 NPSR1Q6W5P4 371 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 SLC38A9Q8NBW4 561 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 GJC3Q8NFK1 279 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 PXT1Q8NFP0 134 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 OR6M1Q8NGM8 313 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 SLC25A44Q96H78 314 aaPredicted RBP9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 SPSB2Q99619 263 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 CRLF2Q9HC73 371 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 ASH2LQ9UBL3 628 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 PMS2P1A4D2B8 440 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 ACOD1A6NK06 481 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 LINC01387J3KSC0 135 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 SELENOFO60613 162 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 GLCEO94923 617 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 AKAIN1P0CW23 69 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 SMIM10L1P0DMW3 83 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 HTR1FP30939 366 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 DGCR2P98153 550 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 CORO6Q6QEF8 472 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 TRILQ7L0X0 811 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 GLB1L2Q8IW92 636 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 OR52N1Q8NH53 320 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 ELP5Q8TE02 316 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 DCUN1D4Q92564 292 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 SMIM10Q96HG1 83 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 WDFY2Q96P53 400 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 RPS10P5Q9NQ39 176 aa9.59□□□□□ -0.87
CARMIL3-202ENST00000559694 ZC3H12DA2A288 527 aaKnown RBP9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 FADS1O60427 444 aa9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 CSRP1P21291 193 aaKnown RBP9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 ADH6P28332 368 aa9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 CD96P40200 585 aa9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 RPS27AP62979 156 aaKnown RBP9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 UBA52P62987 128 aaKnown RBP9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 CLN3Q13286 438 aa9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 TPBGQ13641 420 aa9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 HAVCR2Q8TDQ0 301 aa9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 SMAP2Q8WU79 429 aaPredicted RBP9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 TAAR8Q969N4 342 aa9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 MIB2Q96AX9 1013 aa9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 ALKBH3Q96Q83 286 aaPredicted RBP9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 MED18Q9BUE0 208 aa9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 TXNIPQ9H3M7 391 aa9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 CMC2Q9NRP2 79 aa9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 GPR160Q9UJ42 338 aa9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 HTR3BO95264 441 aa9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 C1QCP02747 245 aa9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 PET100P0DJ07 73 aa9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 SLC2A5P22732 501 aa9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 SOX18P35713 384 aa9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 CCR9P51686 369 aa9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 PCBP3P57721 371 aaKnown RBP9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 RAB11BQ15907 218 aa9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 NLRC3Q7RTR2 1065 aa9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 OR5D14Q8NGL3 314 aa9.58□□□□□ -0.88
CARMIL3-202ENST00000559694 INPP5EQ9NRR6 644 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms