RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 EIF2B1Q14232 305 aaKnown RBP12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 CDONQ4KMG0 1287 aa12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 BEX5Q5H9J7 111 aa12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 RBM48Q5RL73 367 aaKnown RBP12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 ALDH16A1Q8IZ83 802 aa12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 PAQR4Q8N4S7 273 aaPredicted RBP12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 ACBD7Q8N6N7 88 aa12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 OR2AJ1Q8NGZ0 328 aa12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 IPCEF1Q8WWN9 437 aaPredicted RBP12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 ASB17Q8WXJ9 295 aa12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 DCLRE1CQ96SD1 692 aaKnown RBP12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 ATF6BQ99941 703 aa12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 CDADC1Q9BWV3 514 aa12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 YTHDF1Q9BYJ9 559 aaKnown RBP12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 NGBQ9NPG2 151 aa12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 PLEK2Q9NYT0 353 aa12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 CADP27708 2225 aa12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 CSMD1Q96PZ7 3565 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 IRGMA1A4Y4 181 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 A1L4Q6 167 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 EFCAB10A6NFE3 127 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 ZNF878C9JN71 531 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 APOL3O95236 402 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 FADS2O95864 444 aaKnown RBP12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 HTR1AP08908 422 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 STOMP27105 288 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 PCSK6P29122 969 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 WNT5AP41221 380 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 CAPZA2P47755 286 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 ZNF83P51522 516 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 IDH3GP51553 393 aaPredicted RBP12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 BSPH1Q075Z2 132 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 IRF3Q14653 427 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 ADAM5Q6NVV9 412 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 ZNF322Q6U7Q0 402 aaPredicted RBP12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 TMEM108Q6UXF1 575 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 WFDC8Q8IUA0 241 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 ZNF679Q8IYX0 411 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 ZNF295-AS1Q8N0V1 137 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 SLC30A7Q8NEW0 376 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 BPIFB6Q8NFQ5 453 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 ZC3HAV1LQ96H79 300 aaKnown RBP12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 C1QTNF6Q9BXI9 259 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 RNF121Q9H920 327 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 ERVK13-1Q9NX77 482 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 SLCO1C1Q9NYB5 712 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 MRM2Q9UI43 246 aaKnown RBP12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 LAMP5Q9UJQ1 280 aa12.81□□□□□ -0.36
SNRPA1-207ENST00000559309 IQCMA0A1B0GVH7 501 aa12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 A0A1W2PPR1 153 aa12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 SHISA9B4DS77 424 aa12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 ZNF670-ZNF695F2Z2N8 137 aa12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 J3QW42 95 aa12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 ZNF254O75437 659 aa12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 SULT1C4O75897 302 aa12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 ACSM4P0C7M7 580 aa12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 ANOS1P23352 680 aa12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 NR1H2P55055 460 aa12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 PLP2Q04941 152 aa12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 ST3GAL4Q11206 333 aa12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 GALEQ14376 348 aa12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 KRT80Q6KB66 452 aa12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 KCTD18Q6PI47 426 aaPredicted RBP12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 SYS1Q8N2H4 156 aa12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 LILRB1Q8NHL6 650 aaPredicted RBP12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 SGCDQ92629 289 aa12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 PLPPR2Q96GM1 343 aa12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 TMEM80Q96HE8 168 aa12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 HS3ST6Q96QI5 342 aa12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 KCNJ15Q99712 375 aa12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 C1QTNF5Q9BXJ0 243 aa12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 CDCA4Q9BXL8 241 aa12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 ESRP2Q9H6T0 727 aaKnown RBP12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 LRCH1Q9Y2L9 728 aa12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 POLR1DQ9Y2S0 133 aa12.8□□□□□ -0.36
SNRPA1-207ENST00000559309 PKDREJQ9NTG1 2253 aa12.79□□□□□ -0.36
SNRPA1-207ENST00000559309 A6NNC1 897 aa12.79□□□□□ -0.36
SNRPA1-207ENST00000559309 FAM20BO75063 409 aa12.79□□□□□ -0.36
SNRPA1-207ENST00000559309 CDK1P06493 297 aa12.79□□□□□ -0.36
SNRPA1-207ENST00000559309 DBHP09172 617 aa12.79□□□□□ -0.36
SNRPA1-207ENST00000559309 C21orf33P30042 268 aaPredicted RBP12.79□□□□□ -0.36
SNRPA1-207ENST00000559309 HTR5AP47898 357 aa12.79□□□□□ -0.36
SNRPA1-207ENST00000559309 GABARAPL2P60520 117 aa12.79□□□□□ -0.36
SNRPA1-207ENST00000559309 GRB2P62993 217 aaKnown RBP12.79□□□□□ -0.36
SNRPA1-207ENST00000559309 SPOCK1Q08629 439 aa12.79□□□□□ -0.36
SNRPA1-207ENST00000559309 ZNF787Q6DD87 383 aa12.79□□□□□ -0.36
SNRPA1-207ENST00000559309 LRRN1Q6UXK5 716 aa12.79□□□□□ -0.36
SNRPA1-207ENST00000559309 NUP37Q8NFH4 326 aa12.79□□□□□ -0.36
SNRPA1-207ENST00000559309 RPS4Y2Q8TD47 263 aa12.79□□□□□ -0.36
SNRPA1-207ENST00000559309 THEM6Q8WUY1 208 aa12.79□□□□□ -0.36
SNRPA1-207ENST00000559309 SLC7A6Q92536 515 aa12.79□□□□□ -0.36
SNRPA1-207ENST00000559309 C14orf79Q96F83 325 aa12.79□□□□□ -0.36
SNRPA1-207ENST00000559309 RADILQ96JH8 1075 aa12.79□□□□□ -0.36
SNRPA1-207ENST00000559309 NIPAL2Q9H841 368 aa12.79□□□□□ -0.36
SNRPA1-207ENST00000559309 TBCCD1Q9NVR7 557 aa12.79□□□□□ -0.36
SNRPA1-207ENST00000559309 LRP12Q9Y561 859 aa12.79□□□□□ -0.36
SNRPA1-207ENST00000559309 FBN2P35556 2912 aa12.79□□□□□ -0.36
SNRPA1-207ENST00000559309 TMEM129A0AVI4 362 aa12.78□□□□□ -0.36
SNRPA1-207ENST00000559309 M0R1B8 84 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms